RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PPANQ9NQ55 473 aaKnown RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 FBXO6Q9NRD1 293 aaPredicted RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 C1GALT1Q9NS00 363 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 INTS10Q9NVR2 710 aaKnown RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 ACTR10Q9NZ32 417 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 SLC39A10Q9ULF5 831 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 ICKQ9UPZ9 632 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 CHD6Q8TD26 2715 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 AHCTF1Q8WYP5 2266 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 EFCAB8A8MWE9 144 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 ISM1B1AKI9 464 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 GPC4O75487 556 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 BANF1O75531 89 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 SPAG6O75602 509 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 F7P08709 466 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 CHRM5P08912 532 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 CCNYL3P0C7X3 344 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 FGF5P12034 268 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 PKMP14618 531 aaKnown RBP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 LIFP15018 202 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZNF28P17035 718 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 PGAM1P18669 254 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 MAGEA3P43357 314 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 TUBB4BP68371 445 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 RHDQ02161 417 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 TUBB2AQ13885 445 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZNF789Q5FWF6 425 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 PLEKHS1Q5SXH7 462 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 SPESP1Q6UW49 350 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 C6orf15Q6UXA7 325 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 UNC5DQ6UXZ4 953 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 SYT10Q6XYQ8 523 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 CENPUQ71F23 418 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 KCNMB4Q86W47 210 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 TMEM126BQ8IUX1 230 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 DCUN1D3Q8IWE4 304 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 DENND6AQ8IWF6 608 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 CARFQ8N187 725 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 AGGF1Q8N302 714 aaeCLIP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 RAB42Q8N4Z0 105 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 C2orf73Q8N5S3 287 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 ESX1Q8N693 406 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 GALNT6Q8NCL4 622 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 SNF8Q96H20 258 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 BIRC8Q96P09 236 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 ARHGAP9Q9BRR9 750 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 FAM167BQ9BTA0 163 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 TUBB2BQ9BVA1 445 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 SLC7A5P2Q9GIP4 190 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 IARS2Q9NSE4 1012 aaKnown RBP12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 CDYLQ9Y232 598 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
CTDSPL2-209ENST00000560620 PTPRQQ9UMZ3 2332 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 SLCO2B1O94956 709 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 TTC4O95801 387 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 PVRP15151 417 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 ST6GAL1P15907 406 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 UGT2B7P16662 529 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 SLC1A2P43004 574 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 ITGA8P53708 1063 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 ETF1P62495 437 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 CYP4F2P78329 520 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 MORF4L2Q15014 288 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 HIF1AQ16665 826 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 HSP90AA5PQ58FG0 334 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 PWWP2BQ6NUJ5 590 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 TIPARPQ7Z3E1 657 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 TRIM73Q86UV7 250 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 TAX1BP1Q86VP1 789 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 BPHLQ86WA6 291 aaPredicted RBP12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 LMNTD2Q8IXW0 634 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 D2HGDHQ8N465 521 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZBTB2Q8N680 514 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 CFAP36Q96G28 342 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 EBNA1BP2Q99848 306 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 NAT9Q9BTE0 207 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 KCND1Q9NSA2 647 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 SEMA5BQ9P283 1151 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 CHMP2BQ9UQN3 213 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 RUVBL2Q9Y230 463 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 TMEM184BQ9Y519 407 aaPredicted RBP12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 MRFAP1Q9Y605 127 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 NFS1Q9Y697 457 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 FAM169AQ9Y6X4 670 aa12.56□□□□□ -0.4
CTDSPL2-209ENST00000560620 LOC101059948A0A1B0GTJ6 334 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 TMEM150CB9EJG8 249 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 ERVH48-1M5A8F1 160 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 SMAPO00193 183 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 FANCGO15287 622 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 SCRG1O75711 98 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 TIAF1O95411 115 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 DLGAP3O95886 979 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 S1PR4O95977 384 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms