RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 GGTA1PQ4G0N0 100 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 EOGTQ5NDL2 527 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 HORMAD1Q86X24 394 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 OR2T11Q8NH01 316 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 CFAP61Q8NHU2 1237 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 ASB12Q8WXK4 309 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 FAM3CQ92520 227 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 MRGPRX1Q96LB2 322 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 SLC29A3Q9BZD2 475 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 DENND2DQ9H6A0 471 aaPredicted RBP12.37□□□□□ -0.43
USP3-213ENST00000559711 WDR26Q9H7D7 661 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 SLC2A4RGQ9NR83 387 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 SDR39U1Q9NRG7 319 aaPredicted RBP12.37□□□□□ -0.43
USP3-213ENST00000559711 DNAJC11Q9NVH1 559 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 GIMAP2Q9UG22 337 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 RNF11Q9Y3C5 154 aa12.37□□□□□ -0.43
USP3-213ENST00000559711 PCYT1BQ9Y5K3 369 aaPredicted RBP12.37□□□□□ -0.43
USP3-213ENST00000559711 A0A088AWK7 358 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 KLHL33A6NCF5 533 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 NARSO43776 548 aaKnown RBP12.36□□□□□ -0.43
USP3-213ENST00000559711 PEX11AO75192 247 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 ATP6V1G2O95670 118 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 IDO1P14902 403 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 ACADLP28330 430 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
USP3-213ENST00000559711 HTR6P50406 440 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 PFN3P60673 137 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 STX1BP61266 288 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 PCDH1Q08174 1060 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 STX5Q13190 355 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 ABRAXAS2Q15018 415 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 CCDC85BQ15834 202 aaPredicted RBP12.36□□□□□ -0.43
USP3-213ENST00000559711 SLC44A4Q53GD3 710 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 AGKQ53H12 422 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 C6orf136Q5SQH8 315 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 PGM2L1Q6PCE3 622 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 CRTC3Q6UUV7 619 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 IL27RAQ6UWB1 636 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 SCIMPQ6UWF3 145 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 TRIM46Q7Z4K8 759 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 LRRTM4Q86VH4 590 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 AMZ2Q86W34 360 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 FUNDC1Q8IVP5 155 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 SCUBE1Q8IWY4 988 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 ULK2Q8IYT8 1036 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 OXR1Q8N573 874 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 L3MBTL4Q8NA19 623 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 KYQ8NBH2 561 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 RPLP0P6Q8NHW5 317 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 FOXJ1Q92949 421 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 PKP4Q99569 1192 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 THTPAQ9BU02 230 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 C1QTNF7Q9BXJ2 289 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 OSBPL6Q9BZF3 934 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 OR52A5Q9H2C5 316 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 EFCAB1Q9HAE3 211 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 PHPT1Q9NRX4 125 aaPredicted RBP12.36□□□□□ -0.43
USP3-213ENST00000559711 STOX2Q9P2F5 926 aaPredicted RBP12.36□□□□□ -0.43
USP3-213ENST00000559711 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 CCL27Q9Y4X3 112 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 GPR45Q9Y5Y3 372 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.36□□□□□ -0.43
USP3-213ENST00000559711 TRIOBPQ9H2D6 2365 aa12.36□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3DA0A087WVF3 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3IA0A087WXS9 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3EA0A087X179 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3KA0A087X1G2 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 KRT87PA6NCN2 255 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3FA6NER0 549 aaPredicted RBP12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3LB9A6J9 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 AIM2O14862 343 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 ULK1O75385 1050 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 SNRPB2P08579 225 aaKnown RBP12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3HP0C7X1 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 SRFP11831 508 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 HNRNPH1P31943 449 aaKnown RBP12.35□□□□□ -0.43
USP3-213ENST00000559711 ERVK-8P63133 956 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 NFE2L1Q14494 772 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 ZRSR2Q15696 482 aaKnown RBP12.35□□□□□ -0.43
USP3-213ENST00000559711 SMU1Q2TAY7 513 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 CCSMST1Q4G0I0 132 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3GQ6DHY5 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3CQ6IPX1 549 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 DOK6Q6PKX4 331 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 AGTRAPQ6RW13 159 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 FAM83HQ6ZRV2 1179 aaPredicted RBP12.35□□□□□ -0.43
USP3-213ENST00000559711 GK5Q6ZS86 529 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 TBC1D3Q8IZP1 549 aaPredicted RBP12.35□□□□□ -0.43
USP3-213ENST00000559711 DSELQ8IZU8 1212 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 MIER2Q8N344 545 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 SFRP1Q8N474 314 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 SNX31Q8N9S9 440 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 OR56A3Q8NH54 315 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 KLK6Q92876 244 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 USP7Q93009 1102 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 PYCR2Q96C36 320 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 RCN3Q96D15 328 aa12.35□□□□□ -0.43
USP3-213ENST00000559711 MAGEB10Q96LZ2 347 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms