RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 C5AR1P21730 350 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 HOXD9P28356 352 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 GPX6P59796 221 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CHIT1Q13231 466 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 IRAK1BP1Q5VVH5 260 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 PARM1Q6UWI2 310 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 TSPAN33Q86UF1 283 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 PIM3Q86V86 326 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 ARHGAP12Q8IWW6 846 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 PHC3Q8NDX5 983 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 OR2T3Q8NH03 318 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CAPSLQ8WWF8 208 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 COX4I2Q96KJ9 171 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 LENG8Q96PV6 779 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 FZD3Q9NPG1 666 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 A0A0U1RQS6 177 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CCNA2P20248 432 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 ALAS2P22557 587 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 SSR2P43308 183 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 SLC18A1P54219 525 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 SPIDRQ14159 915 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 MTX3Q5HYI7 312 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 HLA-DQA1Q5Y7H0 255 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CHSY3Q70JA7 882 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 PAGE2Q7Z2X7 111 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 BNIPLQ7Z465 357 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CUZD1Q86UP6 607 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 ZC3HC1Q86WB0 502 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 TCAIMQ8N3R3 496 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 FAM120BQ96EK7 910 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 LMLNQ96KR4 655 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 PPP3R2Q96LZ3 170 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 ZSWIM3Q96MP5 696 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 KCTD14Q9BQ13 255 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CCM2Q9BSQ5 444 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 INTS7Q9NVH2 962 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 ITM2BQ9Y287 266 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 AXIN1O15169 862 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 RGS5O15539 181 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CYP7B1O75881 506 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 C8GP07360 202 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 STC1P52823 247 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 C1orf61Q13536 156 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 ARL13AQ5H913 290 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 EGFLAMQ63HQ2 1017 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 DSELQ8IZU8 1212 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 LMX1AQ8TE12 382 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 RLN3Q8WXF3 142 aa10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 EIF2B4Q9UI10 523 aaKnown RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 CAB39Q9Y376 341 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-202ENST00000559694 NPC1O15118 1278 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF8P17098 575 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 NFATC2Q13469 925 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 TRIM25Q14258 630 aaKnown RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SIX1Q15475 284 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ZIK1Q3SY52 487 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ABRAXAS1Q6UWZ7 409 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 UTS2BQ765I0 119 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 GLYATL1Q969I3 302 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 NSMCE2Q96MF7 247 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 NPAS2Q99743 824 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SH3GL1Q99961 368 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 GATA5Q9BWX5 397 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 NLE1Q9NVX2 485 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 RBMX2Q9Y388 322 aaKnown RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 PSAT1Q9Y617 370 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 CCDC154A6NI56 674 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 MATN2O00339 956 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 LINC01565O15544 149 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 PI15O43692 258 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 PAPSS2O95340 614 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 GSNP06396 782 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 CMPK1P30085 196 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 HTRA4P83105 476 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 IL5RAQ01344 420 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 LPAL2Q16609 132 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 UBAP2Q5T6F2 1119 aaKnown RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 CILP2Q8IUL8 1156 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 NRSN1Q8IZ57 195 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SCRN2Q96FV2 425 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 HHIPQ96QV1 700 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 RAD21L1Q9H4I0 556 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF395Q9H8N7 513 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 FAM159BA6NKW6 160 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ZSCAN9O15535 394 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 OR6B1O95007 311 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 LRATO95237 230 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 BMP10O95393 424 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 C6P13671 934 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ADRB3P13945 408 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 MPSTP25325 297 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 CD68P34810 354 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 CXCL12P48061 93 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 PREPP48147 710 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 CLCQ05315 142 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 RUNX1T1Q06455 604 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF648Q5T619 568 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 RALGPS2Q86X27 583 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms