RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 LMO7DNF2Z398 122 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 MYO1CO00159 1063 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 YY2O15391 372 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 TRIM13O60858 407 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 SDC3O75056 442 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 GUCA1CO95843 209 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 S100BP04271 92 aaPredicted RBP17.6■□□□□ 0.41
CLPX-203ENST00000558958 MTHFD1P11586 935 aaKnown RBP17.6■□□□□ 0.41
CLPX-203ENST00000558958 ALDH18A1P54886 795 aaKnown RBP17.6■□□□□ 0.41
CLPX-203ENST00000558958 DNAJB13P59910 316 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 HLA-BQ31612 363 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 LIPMQ5VYY2 423 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 LAIR1Q6GTX8 287 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 MBOAT1Q6ZNC8 495 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 PTGR2Q8N8N7 351 aaPredicted RBP17.6■□□□□ 0.41
CLPX-203ENST00000558958 FAM46DQ8NEK8 389 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 CKAP2Q8WWK9 683 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 RHBDF1Q96CC6 855 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 CCDC138Q96M89 665 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 FERD3LQ96RJ6 166 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 EGFL8Q99944 293 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 ARRDC1-AS1Q9H2J1 176 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 MVB12BQ9H7P6 319 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 UCKL1Q9NWZ5 548 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 NCKIPSDQ9NZQ3 722 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 ZNF624Q9P2J8 865 aaPredicted RBP17.6■□□□□ 0.41
CLPX-203ENST00000558958 A0A1B0GTQ1 180 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 KRT87PA6NCN2 255 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 OR5K4A6NMS3 321 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 DFNA5O60443 496 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 ANXA5P08758 320 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 FGF3P11487 239 aaPredicted RBP17.59■□□□□ 0.41
CLPX-203ENST00000558958 BNIP3Q12983 259 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 GRB7Q14451 532 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 PDK4Q16654 411 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 SULT1C3Q6IMI6 304 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 TTC23LQ6PF05 361 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 IL27RAQ6UWB1 636 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 OR9A1PQ8NGU1 263 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 OR6Y1Q8NGX8 325 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 RAD51AP1Q96B01 352 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 PKP4Q99569 1192 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 PTBP2Q9UKA9 531 aaKnown RBP17.59■□□□□ 0.41
CLPX-203ENST00000558958 CSNK1G3Q9Y6M4 447 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 FRYLO94915 3013 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 ANKRD12Q6UB98 2062 aa17.59■□□□□ 0.41
CLPX-203ENST00000558958 ARHGEF17Q96PE2 2063 aaPredicted RBP17.59■□□□□ 0.41
CLPX-203ENST00000558958 MYO15AQ9UKN7 3530 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 KIR2DS5A0A0G2JLQ3 304 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 A0A0G2JNG1 304 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 STX16-NPEPL1H3BU86 382 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 KIR2DS3K7RE56 304 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 ARHGAP33O14559 1287 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 STX16O14662 325 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 SLC2A4P14672 509 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 XRCC1P18887 633 aaPredicted RBP17.58■□□□□ 0.41
CLPX-203ENST00000558958 BGNP21810 368 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 SLC19A1P41440 591 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 HNMTP50135 292 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 PRKG2Q13237 762 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 KIR2DS5Q14953 304 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 SETDB1Q15047 1291 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 CHI3L2Q15782 390 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 PLA2G2CQ5R387 149 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 NAGSQ8N159 534 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 SLC25A45Q8N413 288 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 SFRP1Q8N474 314 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 SUMF1Q8NBK3 374 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 ZDHHC1Q8WTX9 485 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 SREK1Q8WXA9 508 aaKnown RBP17.58■□□□□ 0.41
CLPX-203ENST00000558958 FBXL8Q96CD0 374 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 MAGEB18Q96M61 343 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 TMEM237Q96Q45 408 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 HGH1Q9BTY7 390 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 CIDEBQ9UHD4 219 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 POLG2Q9UHN1 485 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 DOLKQ9UPQ8 538 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 COLEC10Q9Y6Z7 277 aa17.58■□□□□ 0.41
CLPX-203ENST00000558958 TMEM131Q92545 1883 aa17.58■□□□□ 0.4
CLPX-203ENST00000558958 GPR179Q6PRD1 2367 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 TRBV23OR9-2A0A075B6M9 112 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 TAPBPO15533 448 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 SLC16A8O95907 504 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 ANXA6P08133 673 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 SYPP08247 313 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 NEFHP12036 1026 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 IMPDH1P20839 514 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 NDUFS1P28331 727 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 EPHA8P29322 1005 aaPredicted RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 AGTR2P50052 363 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 NAGLUP54802 743 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 HERVK_113P63132 956 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 ASPHQ12797 758 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 KRT33BQ14525 404 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 CCDC6Q16204 474 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 C18orf21Q32NC0 220 aaPredicted RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 TTC19Q6DKK2 380 aaPredicted RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 RAB44Q7Z6P3 723 aaPredicted RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 SFTPA2Q8IWL1 248 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 TRIM42Q8IWZ5 723 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms