RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 A0A1W2PPV9 198 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 UBA6A0AVT1 1052 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 EFCAB8A8MWE9 144 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 CXorf49A8MYA2 514 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 TERTO14746 1132 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 KLK10O43240 276 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 NDUFS3O75489 264 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 MATN4O95460 622 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 C1orf105O95561 183 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 DLGAP3O95886 979 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 GSTM1P09488 218 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 EBLN1P0CF75 366 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 PKMP14618 531 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 PGAM1P18669 254 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 CSTF2P33240 577 aaKnown RBP eCLIP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 BDKRB1P46663 353 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 CDKN2DP55273 166 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 GPX6P59796 221 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 SLC7A5Q01650 507 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 GSTM4Q03013 218 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 FASTKQ14296 549 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 KYNUQ16719 465 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 LONRF1Q17RB8 773 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 CACHD1Q5VU97 1274 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 LCN10Q6JVE6 187 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 TMEM207Q6UWW9 146 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 VASH2Q86V25 355 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 PLXDC1Q8IUK5 500 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 D2HGDHQ8N465 521 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 C2orf73Q8N5S3 287 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 SIDT2Q8NBJ9 832 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 CD200R1Q8TD46 325 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 SEC14L1Q92503 715 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 SNF8Q96H20 258 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 RUFY1Q96T51 708 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 TCF12Q99081 682 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 NDNQ99608 321 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 LRRC1Q9BTT6 524 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 MVB12BQ9H7P6 319 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 C20orf96Q9NUD7 363 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 SLC39A1Q9NY26 324 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 TSR3Q9UJK0 312 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 CDC23Q9UJX2 597 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 KLHL20Q9Y2M5 609 aa12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 MDC1Q14676 2089 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-207ENST00000558936 ESYT3A0FGR9 886 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 SLC9B1P1A6NJY1 282 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 TOX3O15405 576 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 TSPAN12O95859 305 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 ECHS1P30084 290 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 PKLRP30613 574 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 GMPRP36959 345 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 PAFAH1B1P43034 410 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 CARSP49589 748 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 SNRPNP63162 240 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 SARNPP82979 210 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 GUCY2DQ02846 1103 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 CUL1Q13616 776 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 PTRHD1Q6GMV3 140 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 KCNMB4Q86W47 210 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 AMIGO1Q86WK6 493 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 FAM129CQ86XR2 697 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 LRRC56Q8IYG6 542 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 TBC1D21Q8IYX1 336 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 SNRNP27Q8WVK2 155 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 LCN9Q8WX39 176 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 ZNF501Q96CX3 271 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 CERS2Q96G23 380 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 TRAPPC9Q96Q05 1148 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 OR6C1Q96RD1 312 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 OLFM1Q99784 485 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 AARSD1Q9BTE6 412 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 DDA1Q9BW61 102 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 ZDHHC18Q9NUE0 388 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 ACTR10Q9NZ32 417 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 DMGDHQ9UI17 866 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 ASF1AQ9Y294 204 aa12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 TMEM184BQ9Y519 407 aaPredicted RBP12.24□□□□□ -0.45
RABGGTA-207ENST00000558936 LOC101059948A0A1B0GTJ6 334 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 ARHGEF33A8MVX0 844 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 QSOX1O00391 747 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 WISP3O95389 354 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 ESR1P03372 595 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 CHRM5P08912 532 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 FGF5P12034 268 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 UGT2B7P16662 529 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 SSTR1P30872 391 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 PLCL1Q15111 1095 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 GPR19Q15760 415 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 AARS2Q5JTZ9 985 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 SPANXN3Q5MJ09 141 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 MRNIPQ6NTE8 343 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 PWWP2BQ6NUJ5 590 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 PCGF5Q86SE9 256 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 LRRC6Q86X45 466 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 FBXO36Q8NEA4 188 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 CFAP61Q8NHU2 1237 aa12.23□□□□□ -0.45
RABGGTA-207ENST00000558936 FBXO25Q8TCJ0 367 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms