RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ASPRV1Q53RT3 343 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PIGGQ5H8A4 983 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TMEM196Q5HYL7 178 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 C1orf220Q5T0J3 134 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TMTC4Q5T4D3 741 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 KRT39Q6A163 491 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 ACAD10Q6JQN1 1059 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 ANKRD26P1Q6NSI1 321 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PPP1R2P3Q6NXS1 205 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TTC23LQ6PF05 361 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TIFABQ6ZNK6 161 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TOM1L2Q6ZVM7 507 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 NEK10Q6ZWH5 1172 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 FRA10AC1Q70Z53 315 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 C11orf96Q7Z7L8 435 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 DPP9Q86TI2 863 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 ZNF677Q86XU0 584 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 P3H2Q8IVL5 708 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 ARID3BQ8IVW6 561 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 TTC39CQ8N584 583 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SLC25A41Q8N5S1 370 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PACRGLQ8N7B6 248 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TNIP2Q8NFZ5 429 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 LILRB4Q8NHJ6 448 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 OSR1Q8TAX0 266 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 PNPT1Q8TCS8 783 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 SLC26A7Q8TE54 656 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 ABHD5Q8WTS1 349 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SCARB1Q8WTV0 552 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 BRI3BPQ8WY22 251 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SMG7Q92540 1137 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 RPL36ALQ969Q0 106 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 KIAA1191Q96A73 305 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 CMTM5Q96DZ9 223 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 MED30Q96HR3 178 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TXNDC15Q96J42 360 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 VCPIP1Q96JH7 1222 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 FEM1CQ96JP0 617 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SERAC1Q96JX3 654 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 EGLN2Q96KS0 407 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 CCDC138Q96M89 665 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 FAM111AQ96PZ2 611 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 RMDN3Q96TC7 470 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SH3GL1Q99961 368 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 FAM118BQ9BPY3 351 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 RTKNQ9BST9 563 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 FRMD8Q9BZ67 464 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 NYXQ9GZU5 481 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 DRC3Q9H069 523 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 GLT8D2Q9H1C3 349 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 ZNF385DQ9H6B1 395 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 RPF2Q9H7B2 306 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 C10orf88Q9H8K7 445 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 GPN2Q9H9Y4 310 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 MOV10Q9HCE1 1003 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 MAGEE1Q9HCI5 957 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 C8orf4Q9NR00 106 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 AGPAT3Q9NRZ7 376 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 OLAHQ9NV23 265 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PARVAQ9NVD7 372 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 THAP1Q9NVV9 213 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TRNAU1APQ9NX07 287 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 DUS2Q9NX74 493 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 MCM9Q9NXL9 1143 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 TMOD2Q9NZR1 351 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 KCND2Q9NZV8 630 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 CRNNQ9UBG3 495 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 BCAP29Q9UHQ4 241 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 IPO11Q9UI26 975 aaKnown RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 APPL1Q9UKG1 709 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 SLC8A2Q9UPR5 921 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 NIP7Q9Y221 180 aaKnown RBP eCLIP3.21□□□□□ -1.9
HERC1-203ENST00000558532 CARD8Q9Y2G2 431 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 PLLPQ9Y342 182 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 CPQQ9Y646 472 aa3.21□□□□□ -1.9
HERC1-203ENST00000558532 COL5A3P25940 1745 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 COL5A2P05997 1499 aaPredicted RBP3.21□□□□□ -1.9
HERC1-203ENST00000558532 MN1Q10571 1320 aaPredicted RBP3.2□□□□□ -1.9
HERC1-203ENST00000558532 CNTNAP2Q9UHC6 1331 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 NRXN2Q9P2S2 1712 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 hCG_1818297A0A087WSY0 165 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 IGKV6D-41A0A0C4DH26 115 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 CCDC160A6NGH7 325 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 MEI4A8MW99 385 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 CENPBD1B2RD01 187 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 H3BMQ9 156 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 KPNA4O00629 521 aaPredicted RBP3.2□□□□□ -1.9
HERC1-203ENST00000558532 RRHO14718 337 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 ACOT8O14734 319 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 CLOCKO15516 846 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 MSI1O43347 362 aaKnown RBP3.2□□□□□ -1.9
HERC1-203ENST00000558532 UGT1A9O60656 530 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 JRKO75564 520 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 BCAS2O75934 225 aaPredicted RBP3.2□□□□□ -1.9
HERC1-203ENST00000558532 TPPPO94811 219 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 TMEM63AO94886 807 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 SLITRK3O94933 977 aa3.2□□□□□ -1.9
HERC1-203ENST00000558532 LDHAP00338 332 aaKnown RBP3.2□□□□□ -1.9
HERC1-203ENST00000558532 KRT18P05783 430 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms