RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ALDH1L2Q3SY69 923 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 ASPRV1Q53RT3 343 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 GJB7Q6PEY0 223 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 KDM7AQ6ZMT4 941 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 CATSPER4Q7RTX7 472 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 PELI3Q8N2H9 469 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 THOC3Q96J01 351 aaKnown RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 CNDP2Q96KP4 475 aaKnown RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 LYZL4Q96KX0 146 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 UBXN10Q96LJ8 280 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 NACAP1Q9BZK3 213 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 NAPBQ9H115 298 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 ADNPQ9H2P0 1102 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 POLR1BQ9H9Y6 1135 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 LY9Q9HBG7 655 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 IL1RAPL2Q9NP60 686 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 KRCC1Q9NPI7 259 aaPredicted RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 ZNF302Q9NR11 478 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 DHDHQ9UQ10 334 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 GDAQ9Y2T3 454 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 ITIH6Q6UXX5 1313 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 DCHS2Q6V1P9 2916 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 OR6C68A6NDL8 312 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 FAM90A7PA6NKC0 464 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 FAM90A22PA8MWA6 464 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 FAM90A12PA8MX19 464 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 FAM90A23PA8MXZ1 464 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 STMND1H3BQB6 276 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 TNFRSF13BO14836 293 aaPredicted RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 BCAT2O15382 392 aaPredicted RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 KLF8O95600 359 aaPredicted RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 CAPN3P20807 821 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 CNTFP26441 200 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 SKIV2L2P42285 1042 aaKnown RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 THBS3P49746 956 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 ASIC1P78348 528 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 MPP1Q00013 466 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 ST3GAL1Q11201 340 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 ELAVL2Q12926 359 aaKnown RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 ILKQ13418 452 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 UBAP2Q5T6F2 1119 aaKnown RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 RETSATQ6NUM9 610 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 FAM180BQ6P0A1 224 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 BBS12Q6ZW61 710 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 HORMAD2Q8N7B1 307 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 CNNM3Q8NE01 707 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 C7orf57Q8NEG2 295 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 URB1-AS1Q96HZ7 61 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 TEFMQ96QE5 360 aaKnown RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 FUCA2Q9BTY2 467 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 TMEM245Q9H330 911 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 ECT2Q9H8V3 914 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 NCKIPSDQ9NZQ3 722 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 HES2Q9Y543 173 aa5.81□□□□□ -1.48
RTF1-204ENST00000558117 FLNAP21333 2647 aaKnown RBP5.81□□□□□ -1.48
RTF1-204ENST00000558117 MYH6P13533 1939 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 A0A1W2PNU3 283 aaPredicted RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 HSPB6O14558 160 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 MEIS2O14770 477 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 SPTLC2O15270 562 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 CYP1A2P05177 515 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 KRT7P08729 469 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 T-ENOLP0DO92 83 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 VDRP11473 427 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 CHRNB2P17787 502 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 OPRD1P41143 372 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 CSNK1EP49674 416 aaKnown RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 CLCNKBP51801 687 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 SELENOVP59797 346 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 GOLGA8FQ08AF8 430 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 GRIK3Q13003 919 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 TRAF1Q13077 416 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 SRSF6Q13247 344 aaKnown RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 PDGFRLQ15198 375 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 TAF12Q16514 161 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 EOGTQ5NDL2 527 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 TRMT1LQ7Z2T5 733 aaKnown RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 TIPARPQ7Z3E1 657 aaKnown RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 IGSF8Q969P0 613 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 MARK4Q96L34 752 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 SDF4Q9BRK5 362 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 NPLQ9BXD5 320 aaPredicted RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 TTC12Q9H892 705 aaPredicted RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 CD93Q9NPY3 652 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 HIF1ANQ9NWT6 349 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 GRHL1Q9NZI5 618 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 NOL7Q9UMY1 257 aaKnown RBP5.8□□□□□ -1.48
RTF1-204ENST00000558117 CCL26Q9Y258 94 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 SLCO1B1Q9Y6L6 691 aa5.8□□□□□ -1.48
RTF1-204ENST00000558117 MN1Q10571 1320 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 PRRC2CQ9Y520 2896 aaKnown RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 CASTOR2A6NHX0 329 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 SH2D7A6NKC9 451 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 BECN2A8MW95 431 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 LACTBL1A8MY62 500 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 I6L893 689 aaPredicted RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 RNF113AO15541 343 aaKnown RBP5.79□□□□□ -1.48
RTF1-204ENST00000558117 ZNF217O75362 1048 aa5.79□□□□□ -1.48
RTF1-204ENST00000558117 POLBP06746 335 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms