RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SLC40A1Q9NP59 571 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 G3BP2Q9UN86 482 aaKnown RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 BTRCQ9Y297 605 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 MRPS17Q9Y2R5 130 aaKnown RBP12.18□□□□□ -0.46
SHMT2-233ENST00000557529 ST14Q9Y5Y6 855 aa12.18□□□□□ -0.46
SHMT2-233ENST00000557529 REV3LO60673 3130 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 CDH23Q9H251 3354 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 CHURC1-FNTBB4DL54 471 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 KCNJ13O60928 360 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 CLDN9O95484 217 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 C1orf105O95561 183 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 HOXC4P09017 264 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-233ENST00000557529 GABRG2P18507 467 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 CD72P21854 359 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 PDHA2P29803 388 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 IGFALSP35858 605 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 CPA2P48052 419 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 TPMTP51580 245 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 NFE2L1Q14494 772 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 PTCHD3Q3KNS1 767 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 PLA2G4EQ3MJ16 856 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 GGTA1PQ4G0N0 100 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.17□□□□□ -0.46
SHMT2-233ENST00000557529 HABP4Q5JVS0 413 aaKnown RBP12.17□□□□□ -0.46
SHMT2-233ENST00000557529 OGFOD2Q6N063 350 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 SPATA19Q7Z5L4 167 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 PDZD3Q86UT5 571 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 FAM124AQ86V42 546 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 LONP2Q86WA8 852 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 C10orf67Q8IYJ2 551 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 MCUR1Q96AQ8 359 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 CDK15Q96Q40 435 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 BTBD1Q9H0C5 482 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 ACTR8Q9H981 624 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 ITM2CQ9NQX7 267 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 TAS2R1Q9NYW7 299 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 STOX2Q9P2F5 926 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-233ENST00000557529 POLG2Q9UHN1 485 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 SLC17A4Q9Y2C5 497 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 OR1A2Q9Y585 309 aa12.17□□□□□ -0.46
SHMT2-233ENST00000557529 ATP6AP2A0A1C7CYW4 349 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 GSC2O15499 205 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 ATP6AP2O75787 350 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 KRT6AP02538 564 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 KRT6BP04259 564 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 RPN2P04844 631 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 KRT16P08779 473 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 PRR35P0CG20 571 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 CHRNB1P11230 501 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 IDO1P14902 403 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 ACADLP28330 430 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 MAT2AP31153 395 aaKnown RBP12.16□□□□□ -0.46
SHMT2-233ENST00000557529 BDKRB1P46663 353 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 KRT6CP48668 564 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 ACADVLP49748 655 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 KIAA1024LP59773 190 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 PPP2CBP62714 309 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 PPP2CAP67775 309 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 ELF3P78545 371 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-233ENST00000557529 DMPKQ09013 629 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-233ENST00000557529 GSTA3Q16772 222 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 METRNLQ641Q3 311 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 AGTRAPQ6RW13 159 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 IL27RAQ6UWB1 636 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 XKR5Q6UX68 686 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 Q7L0L9 218 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 SYT13Q7L8C5 426 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 POU5F2Q8N7G0 328 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 DCBLD1Q8N8Z6 715 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 RBM15BQ8NDT2 890 aaKnown RBP12.16□□□□□ -0.46
SHMT2-233ENST00000557529 OR56A3Q8NH54 315 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 HMGB4Q8WW32 186 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 MARK4Q96L34 752 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 GUCD1Q96NT3 240 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 PKP4Q99569 1192 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 MIPEPQ99797 713 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 TIMM29Q9BSF4 260 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 RTKNQ9BST9 563 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 APOOQ9BUR5 198 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 MMADHCQ9H3L0 296 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-233ENST00000557529 ZNHIT2Q9UHR6 403 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 PRDM4Q9UKN5 801 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 ACSL5Q9ULC5 683 aa12.16□□□□□ -0.46
SHMT2-233ENST00000557529 ATG2BQ96BY7 2078 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 ANKRD12Q6UB98 2062 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 LOC100653049A0A140TA62 436 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 PSMD12O00232 456 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 SLC28A1O00337 649 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 FPGTO14772 594 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 SLC31A1O15431 190 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 UGDHO60701 494 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 ULK1O75385 1050 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 RASSF9O75901 435 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 KRT34O76011 436 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 IGLV3-19P01714 112 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 IL9P15248 144 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 KELP23276 732 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 MRPL19P49406 292 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms