RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 GNPDA1P46926 289 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 STC1P52823 247 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 CDK3Q00526 305 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 CDK18Q07002 472 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 NAB1Q13506 487 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 SPARCL1Q14515 664 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 LGSNQ5TDP6 509 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 TMEM71Q6P5X7 295 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 C6orf89Q6UWU4 347 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 RGS9BPQ6ZS82 235 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 MARK2Q7KZI7 788 aaKnown RBP12.25□□□□□ -0.45
SHMT2-230ENST00000557427 YTHDF3Q7Z739 585 aaKnown RBP12.25□□□□□ -0.45
SHMT2-230ENST00000557427 PIGWQ7Z7B1 504 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 TRIM74Q86UV6 250 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 LRRC6Q86X45 466 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 APLFQ8IW19 511 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-230ENST00000557427 MGARPQ8TDB4 240 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 ZDHHC1Q8WTX9 485 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 C19orf60Q96EN9 201 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 STAMBPL1Q96FJ0 436 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 TEKT5Q96M29 485 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 MLXIPLQ9NP71 852 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 FBXO8Q9NRD0 319 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 SUFUQ9UMX1 484 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 SLC5A6Q9Y289 635 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 PLEKHM1Q9Y4G2 1056 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 A8MU76 341 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 AP3B1O00203 1094 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 TM9SF1O15321 606 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 HNRNPRO43390 633 aaKnown RBP12.24□□□□□ -0.45
SHMT2-230ENST00000557427 SPAG7O75391 227 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 AP2A1O95782 977 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 SLC4A1P02730 911 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 ZNF28P17035 718 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 PGAM1P18669 254 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 CD68P34810 354 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-230ENST00000557427 DLSTP36957 453 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 GRIA1P42261 906 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 SERPINB9P50453 376 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 WDR4P57081 412 aaKnown RBP12.24□□□□□ -0.45
SHMT2-230ENST00000557427 SLC18A2Q05940 514 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 DPTQ07507 201 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 FRG1Q14331 258 aaKnown RBP12.24□□□□□ -0.45
SHMT2-230ENST00000557427 ITIH4Q14624 930 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 KCTD11Q693B1 232 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 ZNF449Q6P9G9 518 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 CEACAM20Q6UY09 585 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 ADAMTSL4Q6UY14 1074 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 ARHGAP22Q7Z5H3 698 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 NAGSQ8N159 534 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 MPP5Q8N3R9 675 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 MTBPQ96DY7 904 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 MRRFQ96E11 262 aaKnown RBP12.24□□□□□ -0.45
SHMT2-230ENST00000557427 C5orf34Q96MH7 638 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 PPP1R2P1Q96PQ5 205 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 GORASP1Q9BQQ3 440 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 TRIT1Q9H3H1 467 aaKnown RBP12.24□□□□□ -0.45
SHMT2-230ENST00000557427 FAM83DQ9H4H8 585 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 MOCS1Q9NZB8 636 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 TAAR2Q9P1P5 351 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 CROTQ9UKG9 612 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 RRP15Q9Y3B9 282 aaKnown RBP12.24□□□□□ -0.45
SHMT2-230ENST00000557427 PCDHB3Q9Y5E6 796 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 MAD1L1Q9Y6D9 718 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 FAM169AQ9Y6X4 670 aa12.24□□□□□ -0.45
SHMT2-230ENST00000557427 CDC14CA4D256 554 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 CBX6O95503 412 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 SOD1P00441 154 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 MT-ND3P03897 115 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
SHMT2-230ENST00000557427 SNRPAP09012 282 aaKnown RBP12.23□□□□□ -0.45
SHMT2-230ENST00000557427 KRT4P19013 534 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 NFKB1P19838 968 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 CNTFP26441 200 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 AK4P27144 223 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-230ENST00000557427 SPINT3P49223 89 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 CTBSQ01459 385 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 MAP7Q14244 749 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 PRPSAP1Q14558 356 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 SPANXN3Q5MJ09 141 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 SLC30A9Q6PML9 568 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 LYSMD3Q7Z3D4 306 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 TAX1BP1Q86VP1 789 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 NLRP8Q86W28 1048 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 C4orf33Q8N1A6 199 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 SLC25A41Q8N5S1 370 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 ESX1Q8N693 406 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 BANPQ8N9N5 519 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 CCDC197Q8NCU1 140 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 GDAP1Q8TB36 358 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 TRIB3Q96RU7 358 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 RANBP9Q96S59 729 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 LYSMD1Q96S90 227 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 ZPBPQ9BS86 351 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 GPR63Q9BZJ6 419 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 ZMYND15Q9H091 742 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 ZFYVE1Q9HBF4 777 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
SHMT2-230ENST00000557427 SAMD15Q9P1V8 674 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms