RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CDC123O75794 336 aaPredicted RBP3.62□□□□□ -1.83
VRK1-207ENST00000557352 CCNDBP1O95273 360 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 ACTN1P12814 892 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 SLC8A3P57103 927 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 ENPP2Q13822 863 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 DCAF10Q5QP82 559 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 RARS2Q5T160 578 aaKnown RBP3.62□□□□□ -1.83
VRK1-207ENST00000557352 DOK6Q6PKX4 331 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 CORO6Q6QEF8 472 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 CFAP77Q6ZQR2 320 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 CPLX4Q7Z7G2 160 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 GALNT5Q7Z7M9 940 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 ZNF554Q86TJ5 538 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 OR2T11Q8NH01 316 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 HSD17B8Q92506 261 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 DAZLQ92904 295 aaKnown RBP3.62□□□□□ -1.83
VRK1-207ENST00000557352 OR2A14Q96R47 310 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 MYADMQ96S97 322 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 POLR3GLQ9BT43 218 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 HGH1Q9BTY7 390 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 SMC4Q9NTJ3 1288 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 MTMR6Q9Y217 621 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 CHD2O14647 1828 aaKnown RBP3.62□□□□□ -1.83
VRK1-207ENST00000557352 USP32Q8NFA0 1604 aa3.62□□□□□ -1.83
VRK1-207ENST00000557352 TDRD15B5MCY1 1934 aaKnown RBP3.62□□□□□ -1.83
VRK1-207ENST00000557352 ANKRD26Q9UPS8 1709 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 A2ML1A8K2U0 1454 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 SCAF11Q99590 1463 aaKnown RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 ARHGAP23Q9P227 1491 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 LIPT2A6NK58 231 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 ATP6V0E1O15342 81 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 RTN3O95197 1032 aaPredicted RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 GH2P01242 217 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 HSPA1AP0DMV8 641 aaKnown RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 HSPA1BP0DMV9 641 aaKnown RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 CDH2P19022 906 aaPredicted RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 GATA2P23769 480 aaPredicted RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 PPP2R2BQ00005 443 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 CDR2Q01850 454 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 HNRNPDQ14103 355 aaKnown RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 UGP2Q16851 508 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 GCNT6Q5T4J0 391 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 GKAP1Q5VSY0 366 aaPredicted RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 ADALQ6DHV7 355 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 PSRC1Q6PGN9 363 aaPredicted RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 TMTC2Q8N394 836 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 HPSE2Q8WWQ2 592 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 MAGED4Q96JG8 741 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 DACH2Q96NX9 599 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 ZNF300Q96RE9 604 aaPredicted RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 DDOQ99489 341 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 ACKR4Q9NPB9 350 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 CCDC177Q9NQR7 707 aaPredicted RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 RNF186Q9NXI6 227 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 ROCK2O75116 1388 aaKnown RBP3.61□□□□□ -1.83
VRK1-207ENST00000557352 USP47Q96K76 1375 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 ITSN1Q15811 1721 aa3.61□□□□□ -1.83
VRK1-207ENST00000557352 CPS1P31327 1500 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 ASXL1Q8IXJ9 1541 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 CEP170BQ9Y4F5 1589 aaPredicted RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 ALKQ9UM73 1620 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 TMEM63AO94886 807 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 DUS4LO95620 317 aaKnown RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 AGR2O95994 175 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 PSMA4P25789 261 aaKnown RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 SHC1P29353 583 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 JADE1Q6IE81 842 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 CLEC17AQ6ZS10 378 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 OR1J1Q8NGS3 322 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 SGK494Q96LW2 274 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 SEC62Q99442 399 aaKnown RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 ABHD6Q9BV23 337 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 P2RY12Q9H244 342 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 NPAP1Q9NZP6 1156 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 PNMA2Q9UL42 364 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 TMEM98Q9Y2Y6 226 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 SPIN1Q9Y657 262 aaPredicted RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 PIAS3Q9Y6X2 628 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 ZHX2Q9Y6X8 837 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 XRN1Q8IZH2 1706 aaKnown RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 SOS1Q07889 1333 aaPredicted RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 AKAP12Q02952 1782 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 EIF3AQ14152 1382 aaKnown RBP3.6□□□□□ -1.83
VRK1-207ENST00000557352 TECPR2O15040 1411 aa3.6□□□□□ -1.83
VRK1-207ENST00000557352 ADGRB2O60241 1585 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 IGKV6D-41A0A0C4DH26 115 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 MED19A0JLT2 244 aaPredicted RBP3.59□□□□□ -1.83
VRK1-207ENST00000557352 ELOVL7A1L3X0 281 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 NDUFS4O43181 175 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 PI15O43692 258 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 SRSF10O75494 262 aaKnown RBP3.59□□□□□ -1.83
VRK1-207ENST00000557352 KHDRBS3O75525 346 aaKnown RBP3.59□□□□□ -1.83
VRK1-207ENST00000557352 PIGNO95427 931 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 NMBRP28336 390 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 MAGEA11P43364 429 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 ASTE1Q2TB18 679 aaPredicted RBP3.59□□□□□ -1.83
VRK1-207ENST00000557352 TCTEX1D4Q5JR98 221 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 CPSF7Q8N684 471 aaKnown RBP3.59□□□□□ -1.83
VRK1-207ENST00000557352 IL17REQ8NFR9 667 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms