RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CNOT3O75175 753 aaKnown RBP12.21□□□□□ -0.45
SHMT2-223ENST00000556689 GYPCP04921 128 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 UMODP07911 640 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 ALAS2P22557 587 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 PDHA2P29803 388 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 SLC1A1P43005 524 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 GABRA4P48169 554 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 GEMP55040 296 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 FOXL2P58012 376 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 CDC16Q13042 620 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 RPA4Q13156 261 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 BOP1Q14137 746 aaKnown RBP12.21□□□□□ -0.45
SHMT2-223ENST00000556689 SLC9A5Q14940 896 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 ZIC1Q15915 447 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 DEFB110Q30KQ9 67 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 AGAP7PQ5VUJ5 663 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 IRAK1BP1Q5VVH5 260 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 PRAMEF13Q5VWM6 474 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 IGFL2Q6UWQ7 119 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 RANBP10Q6VN20 620 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 UNC5AQ6ZN44 842 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 TRIM73Q86UV7 250 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 NXPE1Q8N323 547 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 AGAP4Q96P64 663 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 NDC1Q9BTX1 674 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 HGH1Q9BTY7 390 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 FICDQ9BVA6 458 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 IRAK4Q9NWZ3 460 aa12.21□□□□□ -0.45
SHMT2-223ENST00000556689 HACD1B0YJ81 288 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 PRSS44E7EML9 344 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 E2F3O00716 465 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 ANXA9O76027 345 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 CRTAMO95727 393 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 CTSBP07858 339 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 UGT2B7P16662 529 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 ITGALP20701 1170 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 MMP11P24347 488 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 SHMT2P34897 504 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 TSFMP43897 325 aaKnown RBP12.2□□□□□ -0.46
SHMT2-223ENST00000556689 RIPPLY3P57055 190 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 TMPRSS15P98073 1019 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 TAZQ16635 292 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 ASTE1Q2TB18 679 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-223ENST00000556689 ZNF658BQ4V348 819 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-223ENST00000556689 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 MCEMP1Q8IX19 187 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 RHOT2Q8IXI1 618 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 OR13C4Q8NGS5 318 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 OR2A14Q96R47 310 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 ZDHHC3Q9NYG2 299 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 FBXL4Q9UKA2 621 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 PLCL2Q9UPR0 1127 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 ICKQ9UPZ9 632 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 HYOU1Q9Y4L1 999 aa12.2□□□□□ -0.46
SHMT2-223ENST00000556689 HEATR9A2RTY3 570 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 AKR1B10O60218 316 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 STSP08842 583 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 CHRM5P08912 532 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-223ENST00000556689 GSTM1P09488 218 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 PIM1P11309 404 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-223ENST00000556689 GSTM4Q03013 218 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 ZNF169Q14929 603 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-223ENST00000556689 TLR1Q15399 786 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 GPR33Q49SQ1 333 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 B3GNTL1Q67FW5 361 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-223ENST00000556689 OVCH1Q7RTY7 1134 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 TMEM151BQ8IW70 566 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 DNAJC22Q8N4W6 341 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 DENND1AQ8TEH3 1009 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 CNDP1Q96KN2 507 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 C19orf43Q9BQ61 176 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 TRIM5Q9C035 493 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 EPS8L2Q9H6S3 715 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 SLC22A11Q9NSA0 550 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 OR6C2Q9NZP2 312 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 COPG2Q9UBF2 871 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 POLG2Q9UHN1 485 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 CDC23Q9UJX2 597 aa12.19□□□□□ -0.46
SHMT2-223ENST00000556689 AAR2Q9Y312 384 aaKnown RBP12.19□□□□□ -0.46
SHMT2-223ENST00000556689 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHMT2-223ENST00000556689 POLEQ07864 2286 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 IGLV3-16A0A075B6K0 115 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 A0A0J9YY10 115 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 SPOPO43791 374 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 ALBP02768 609 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 TPM1P09493 284 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 COMTP21964 271 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 ADRA1AP35348 466 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 ARSFP54793 590 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 MSLNQ13421 630 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-223ENST00000556689 SLC5A12Q1EHB4 618 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 TFDP3Q5H9I0 405 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 FCRL6Q6DN72 434 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 ITPRIPL1Q6GPH6 555 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 FJX1Q86VR8 437 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 GAS2L3Q86XJ1 694 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 PARP9Q8IXQ6 854 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 OR8K1Q8NGG5 319 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms