RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 EML4Q9HC35 981 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 BPIFA1Q9NP55 256 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SAR1AQ9NR31 198 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 GDE1Q9NZC3 331 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 XPR1Q9UBH6 696 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SUCOQ9UBS9 1254 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SLCO3A1Q9UIG8 710 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 FBXO10Q9UK96 956 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 PRDM4Q9UKN5 801 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 NDRG2Q9UN36 371 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 SLC12A4Q9UP95 1085 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 DNAJC16Q9Y2G8 782 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 MRPS17Q9Y2R5 130 aaKnown RBP6.72□□□□□ -1.33
SLIRP-204ENST00000555890 PPIL1Q9Y3C6 166 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 RAP2CQ9Y3L5 183 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 PCDHB1Q9Y5F3 818 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 CAPN7Q9Y6W3 813 aa6.72□□□□□ -1.33
SLIRP-204ENST00000555890 APCP25054 2843 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 NBASA2RRP1 2371 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 GLYATL1P3A0A0U1RQE8 302 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CDC14CA4D256 554 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TARM1B6A8C7 271 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 E5RI56 91 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SLCO1B7G3V0H7 640 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 H3BMM5 538 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 LINC01387J3KSC0 135 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 RGS13O14921 159 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 HGSO14964 777 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ITM2AO43736 263 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 DLX3O60479 287 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 NPHS1O60500 1241 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ECI2O75521 394 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF821O75541 412 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 LYPLA1O75608 230 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ESR1P03372 595 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CYP17A1P05093 508 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CISD3P0C7P0 127 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TPBGLP0DKB5 382 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CYP2A6P11509 494 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TFEBP19484 476 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 XPAP23025 273 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 FCARP24071 287 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 GKP32189 559 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SPAM1P38567 509 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 VIPR2P41587 438 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 NAGLUP54802 743 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ADARP55265 1226 aaKnown RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CDKN2DP55273 166 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 NAA20P61599 178 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SUMO1P63165 101 aaKnown RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 XIAPP98170 497 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 DLG1Q12959 904 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 PEX6Q13608 980 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ARHGEF7Q14155 803 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 RCN2Q14257 317 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TBCCQ15814 346 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TECRLQ5HYJ1 363 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 FAM78AQ5JUQ0 283 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF549Q6P9A3 640 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 BRAT1Q6PJG6 821 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TXNDC11Q6PKC3 985 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 DPY19L3Q6ZPD9 716 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 MTSS1LQ765P7 747 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 PIWIL4Q7Z3Z4 852 aaKnown RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SNX20Q7Z614 316 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 MTDHQ86UE4 582 aaKnown RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 WDR5BQ86VZ2 330 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 YAF2Q8IY57 180 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 RBFAQ8N0V3 343 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 VWA5B2Q8N398 1253 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SPEM1Q8N4L4 309 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CCNYL1Q8N7R7 359 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 PNPLA1Q8N8W4 532 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 FAM13CQ8NE31 585 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 STAG3L4Q8TBR4 150 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 HCAR2Q8TDS4 363 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 KLHL29Q96CT2 875 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ECHDC3Q96DC8 303 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 FAR2Q96K12 515 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CNDP1Q96KN2 507 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SLC6A18Q96N87 628 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SMIM14Q96QK8 99 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 OSBPL1AQ9BXW6 950 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 CIPCQ9C0C6 399 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TFB2MQ9H5Q4 396 aaKnown RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 ASB8Q9H765 288 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 KCNK13Q9HB14 408 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TRPV4Q9HBA0 871 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 RAD18Q9NS91 495 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 PNPOQ9NVS9 261 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 DNAJC28Q9NX36 388 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 NCKIPSDQ9NZQ3 722 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 DEC1Q9P2X7 70 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 MARCOQ9UEW3 520 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TRMT6Q9UJA5 497 aaKnown RBP6.71□□□□□ -1.34
SLIRP-204ENST00000555890 TMCO1Q9UM00 188 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 PLA2G4CQ9UP65 541 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SLC27A6Q9Y2P4 619 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms