RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SHMT2P34897 504 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 HSD17B2P37059 387 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 LSSP48449 732 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 SLC12A2P55011 1212 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 FASTKD3Q14CZ7 662 aaKnown RBP10.31□□□□□ -0.76
TMEM260-206ENST00000555046 TRADDQ15628 312 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 PHF19Q5T6S3 580 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 GRTP1Q5TC63 336 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 TMEM164Q5U3C3 297 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 NKAIN2Q5VXU1 208 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 FAM45BPQ6NSW5 357 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 TRMT10BQ6PF06 316 aaKnown RBP10.31□□□□□ -0.76
TMEM260-206ENST00000555046 STRA8Q7Z7C7 330 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 AMIGO1Q86WK6 493 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 DCUN1D3Q8IWE4 304 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 LILRA3Q8N6C8 439 aaPredicted RBP10.31□□□□□ -0.76
TMEM260-206ENST00000555046 AGBL5Q8NDL9 886 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 OR4E2Q8NGC2 313 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 FAM45AQ8TCE6 357 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 NXPE2Q96DL1 559 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 CD180Q99467 661 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 RAB11FIP5Q9BXF6 653 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 TBC1D10AQ9BXI6 508 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 B3GNT4Q9C0J1 378 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 CCDC86Q9H6F5 360 aaKnown RBP10.31□□□□□ -0.76
TMEM260-206ENST00000555046 POLR1BQ9H9Y6 1135 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 RDH14Q9HBH5 336 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 SYTL2Q9HCH5 934 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 LRRC4CQ9HCJ2 640 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 HRASLS2Q9NWW9 162 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 SLC39A10Q9ULF5 831 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 PCDHGA8Q9Y5G5 932 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 CFAP20Q9Y6A4 193 aaKnown RBP10.31□□□□□ -0.76
TMEM260-206ENST00000555046 AK5Q9Y6K8 562 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 PTPRBP23467 1997 aa10.31□□□□□ -0.76
TMEM260-206ENST00000555046 IGHV5-10-1A0A0J9YXX1 117 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 TCRBV9S1A1TA0A576 114 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 FAM149AA5PLN7 773 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 OR6C74A6NCV1 312 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 PABPN1LA6NDY0 278 aaKnown RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 ZNF839A8K0R7 811 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 C2orf74A8MZ97 194 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CAPN5O15484 640 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 ZBTB14O43829 449 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 NIPSNAP2O75323 286 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 MATN4O95460 622 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CATP04040 527 aaKnown RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 RHOXF2BP0C7M4 288 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 JMJD7P0C870 316 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 MPC1LP0DKB6 136 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 TYRP1P17643 537 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 MCM3P25205 808 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 SPRP35270 261 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 GP5P40197 560 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CAPZBP47756 277 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CLCN7P51798 805 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CSE1LP55060 971 aaKnown RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 IL2P60568 153 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 MPP1Q00013 466 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 POU4F1Q01851 419 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 PRKG2Q13237 762 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 RTP5Q14D33 572 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 ZNF789Q5FWF6 425 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 ZNF549Q6P9A3 640 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 RAB11FIP2Q7L804 512 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 BPHLQ86WA6 291 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 ZNF761Q86XN6 746 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 KMT5CQ86Y97 462 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CTAGE3PQ8IX95 158 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 UNC5BQ8IZJ1 945 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 FBXO39Q8N4B4 442 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 GPATCH11Q8N954 259 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CFAP61Q8NHU2 1237 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 MDM1Q8TC05 714 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 UBXN4Q92575 508 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 TSPAN17Q96FV3 270 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 ATXN7L3BQ96GX2 97 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 C9orf72Q96LT7 481 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CYTH2Q99418 400 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 RHOXF2Q9BQY4 288 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 TRIM54Q9BYV2 358 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 RHOJQ9H4E5 214 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 ATXN7L1Q9ULK2 861 aaPredicted RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 CDYLQ9Y232 598 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 TDRKHQ9Y2W6 561 aaKnown RBP10.3□□□□□ -0.76
TMEM260-206ENST00000555046 IKBKGQ9Y6K9 419 aa10.3□□□□□ -0.76
TMEM260-206ENST00000555046 OR5K3A6NET4 321 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 FAM159BA6NKW6 160 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 PLD2O14939 933 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 SLC16A5O15375 505 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 RASSF9O75901 435 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 FKBP9O95302 570 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 SLU7O95391 586 aaKnown RBP10.29□□□□□ -0.76
TMEM260-206ENST00000555046 C9P02748 559 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 TUBBP07437 444 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 HIST1H2AGP0C0S8 130 aaPredicted RBP10.29□□□□□ -0.76
TMEM260-206ENST00000555046 ANKRD34CP0C6C1 535 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 THRAP10827 490 aa10.29□□□□□ -0.76
TMEM260-206ENST00000555046 HIST1H2ADP20671 130 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms