RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ENDOVQ8N8Q3 282 aaKnown RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 SNX33Q8WV41 574 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 MGAT4AQ9UM21 535 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 RPL36Q9Y3U8 105 aaKnown RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 TBX1O43435 398 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 PRKCHP24723 683 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 RORCP51449 518 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 TUBA4AP68366 448 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 PRR5P85299 388 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 TIGD6Q17RP2 521 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 SPATS1Q496A3 300 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 CYP2U1Q7Z449 544 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 TSEN15Q8WW01 171 aaKnown RBP13.71□□□□□ -0.22
VTI1B-204ENST00000554659 DNASE1L2Q92874 299 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF599Q96NL3 588 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 OSBPL2Q9H1P3 480 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 IGFLR1Q9H665 355 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.71□□□□□ -0.225e-7■■■■□ 24.2
VTI1B-204ENST00000554659 ARL5AQ9Y689 179 aa13.71□□□□□ -0.22
VTI1B-204ENST00000554659 KLRG2A4D1S0 409 aaPredicted RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 FABP12A6NFH5 140 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CD36P16671 472 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 IDSP22304 550 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 PTGS2P35354 604 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CHRNA4P43681 627 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 IQCCQ4KMZ1 466 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 FAM91A1Q658Y4 838 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF563Q8TA94 476 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 ESAMQ96AP7 390 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CFL2Q9Y281 166 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 FCF1Q9Y324 198 aaKnown RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 A0A0G2JPF8 293 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 HNRNPCL3B7ZW38 293 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 TEX46H3BTG2 121 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 LDOC1O95751 146 aaPredicted RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 HNRNPCL4P0DMR1 293 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 LAG3P18627 525 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 KLF1Q13351 362 aaPredicted RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 SLC51AQ86UW1 340 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 RANBP3LQ86VV4 465 aaPredicted RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 TMEM126BQ8IUX1 230 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 PIWIL1Q96J94 861 aaKnown RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 TRIM2Q9C040 744 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 BRINP2Q9C0B6 783 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 EHD1Q9H4M9 534 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 PTBP2Q9UKA9 531 aaKnown RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 TLR6Q9Y2C9 796 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 SPEF1Q9Y4P9 236 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 DLX3O60479 287 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 POU2F1P14859 743 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 GNAZP19086 355 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 DNAJA1P31689 397 aaKnown RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 BTN3A2P78410 334 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CES5AQ6NT32 575 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CLEC20AQ6ZU45 233 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CHST9Q7L1S5 443 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 ZC3HC1Q86WB0 502 aaKnown RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 PEX5LQ8IYB4 626 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 NAT16Q8N8M0 369 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 SLC9A6Q92581 669 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 FUBP3Q96I24 572 aaKnown RBP eCLIP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CGREF1Q99674 301 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CST11Q9H112 138 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 MAGEE1Q9HCI5 957 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 ZBTB26Q9HCK0 441 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 CARD8Q9Y2G2 431 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 A0A075B6Q4 140 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 FFAR2O15552 330 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 GIMD1P0DJR0 217 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 MYCLP1P12525 358 aaPredicted RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 PRPS1L1P21108 318 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 FMO3P31513 532 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 RHDQ02161 417 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 MBLAC2Q68D91 279 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 KLHL35Q6PF15 583 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 SNX20Q7Z614 316 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 GPR22Q99680 433 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 PKP2Q99959 881 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 SLC6A15Q9H2J7 730 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 EXO5Q9H790 373 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 PAK6Q9NQU5 681 aaPredicted RBP13.7□□□□□ -0.22
VTI1B-204ENST00000554659 ACTR3BQ9P1U1 418 aa13.7□□□□□ -0.22
VTI1B-204ENST00000554659 HLA-DQB2P05538 268 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CHRM5P08912 532 aaPredicted RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 PDCD4Q53EL6 469 aaKnown RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 KCTD13Q8WZ19 329 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 PMM1Q92871 262 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 PCBD2Q9H0N5 130 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 ZDHHC2Q9UIJ5 367 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 BCAS2O75934 225 aaPredicted RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CXCL14O95715 111 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 VBP1P61758 197 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 NPTX1Q15818 432 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 MSS51Q4VC12 460 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CRTC2Q53ET0 693 aaPredicted RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 FRRS1Q6ZNA5 592 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms