RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 FCHO2Q0JRZ9 810 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TRAF2Q12933 501 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TMED1Q13445 227 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ZIC1Q15915 447 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 OCLNQ16625 522 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ADPRMQ3LIE5 342 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GPR158Q5T848 1215 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TMEM198Q66K66 360 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ABRAXAS1Q6UWZ7 409 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 UNC5DQ6UXZ4 953 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 EIF3MQ7L2H7 374 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TSPYL5Q86VY4 417 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ANKRD46Q86W74 232 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DHFR2Q86XF0 187 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DCP2Q8IU60 420 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SLC22A15Q8IZD6 547 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 C2orf69Q8N8R5 385 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SNX31Q8N9S9 440 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SREK1Q8WXA9 508 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 NDRG1Q92597 394 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 FCGR1BQ92637 280 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PSMG2Q969U7 264 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 C12orf43Q96C57 262 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 MRPL1Q9BYD6 325 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ALG2Q9H553 416 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CPNE5Q9HCH3 593 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ASAH2Q9NR71 780 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GID8Q9NWU2 228 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 AFF4Q9UHB7 1163 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 AKT3Q9Y243 479 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 WDR37Q9Y2I8 494 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SLC27A6Q9Y2P4 619 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DNMT3AQ9Y6K1 912 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SH3D21A4FU49 640 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 METTL15A6NJ78 407 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SMIM23A6NLE4 172 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 NBNO60934 754 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 EPN2O95208 641 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CLPTM1O96005 669 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 ENO3P13929 434 aaPredicted RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 TCN1P20061 433 aaPredicted RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 AKAP5P24588 427 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 MAP4P27816 1152 aaKnown RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 ACADLP28330 430 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SERPINB1P30740 379 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 MAN2A2P49641 1150 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SGSHP51688 502 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 NAGLUP54802 743 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 OXCT1P55809 520 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 GNA12Q03113 381 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 RBBP4Q09028 425 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 ELAVL2Q12926 359 aaKnown RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 DCTN2Q13561 401 aaKnown RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CYP2A13Q16696 494 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 TMEM52BQ4KMG9 183 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 C6orf163Q5TEZ5 329 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 GPR107Q5VW38 600 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SUSD1Q6UWL2 747 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 DPPA4Q7L190 304 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CATSPER4Q7RTX7 472 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SAPCD2Q86UD0 394 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CMIPQ8IY22 773 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SLC43A2Q8N370 569 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 OR6B3Q8NGW1 331 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SETD6Q8TBK2 473 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 PMM1Q92871 262 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 HDAC10Q969S8 669 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 MCUR1Q96AQ8 359 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 LRIG1Q96JA1 1093 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 NPAS2Q99743 824 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 BHLHE41Q9C0J9 482 aaPredicted RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 ANKRD19PQ9H560 264 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SLC32A1Q9H598 525 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 IKZF5Q9H5V7 419 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 NGRNQ9NPE2 291 aaKnown RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 DYRK4Q9NR20 520 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 PSORS1C1Q9UIG5 152 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 HEY1Q9Y5J3 304 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CCL15-CCL14A0A0B4J2E2 113 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 A0A1B0GVG6 124 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 A0A1B0GVM2 712 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 SLC12A8A0AV02 714 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 E2F8A0AVK6 867 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CCDC154A6NI56 674 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 ZAR1LA6NP61 321 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 ANKRD66B4E2M5 251 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 H7C4K7 107 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 ENPP3O14638 875 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 HSPA4LO95757 839 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 C8GP07360 202 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 PKMP14618 531 aaKnown RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 JUPP14923 745 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 PSMC3P17980 439 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CD53P19397 219 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 CD22P20273 847 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 DCTP40126 519 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 EIF2DP41214 584 aaKnown RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 XCR1P46094 333 aa3.36□□□□□ -1.87
SEC23A-207ENST00000554615 RPS9P46781 194 aaKnown RBP3.36□□□□□ -1.87
SEC23A-207ENST00000554615 HUNKP57058 714 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms