RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PACSIN2Q9UNF0 486 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 DMTF1Q9Y222 760 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 WBP11Q9Y2W2 641 aaKnown RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 GMPPBQ9Y5P6 360 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 ZFP37Q9Y6Q3 630 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-227ENST00000554491 MROH7-TTC4A0A0A0MT08 1334 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 NRCAMQ92823 1304 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 SCN5AQ14524 2016 aa4.36□□□□□ -1.71
ATXN3-227ENST00000554491 FASNP49327 2511 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 FOCADQ5VW36 1801 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ZNFX1Q9P2E3 1918 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 hCG_1642624A0A1W2PR95 340 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TCRBV7S2A1N4TA0A589 114 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RAB19A4D1S5 217 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CDHR4A6H8M9 788 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PRR23AA6NEV1 266 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 HMX3A6NHT5 357 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 F8W036 122 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 K7ERQ8 282 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 WRBO00258 174 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PGRMC1O00264 195 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CCRL2O00421 344 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 FPGTO14772 594 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CASC3O15234 703 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CLDN3O15551 220 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SEPT4O43236 478 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 BUB1O43683 1085 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 NOL3O60936 208 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SRGAP2O75044 1071 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PEX11AO75192 247 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PROP1O75360 226 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ULK1O75385 1050 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ERN1O75460 977 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TRMUO75648 421 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PIAS2O75928 621 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 MYO1DO94832 1006 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ENDOD1O94919 500 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PTBP3O95758 552 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PGK2P07205 417 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 GALTP07902 379 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 HOXC6P09630 235 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 DBTP11182 482 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PRPS2P11908 318 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PRG2P13727 222 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 APEHP13798 732 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 MYOGP15173 224 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ITGALP20701 1170 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 F8A1P23610 371 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CHMP24386 653 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 GJB2P29033 226 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CTNNB1P35222 781 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RCVRNP35243 200 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SERPINB5P36952 375 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 MCAMP43121 646 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CCR10P46092 362 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 GYG1P46976 350 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CCT3P49368 545 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 GATMP50440 423 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SLC26A2P50443 739 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 NKX2-5P52952 324 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SCAND1P57086 179 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SPCS3P61009 180 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 NCALDP61601 193 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ASIC1P78348 528 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PMS2P3Q13401 168 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 MTMR1Q13613 665 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PLS1Q14651 629 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 POU6F1Q14863 301 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CLCA4Q14CN2 919 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 VEPH1Q14D04 833 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 MORF4L2Q15014 288 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PON2Q15165 354 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 LTB4RQ15722 352 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SMTNL2Q2TAL5 461 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 EDRF1Q3B7T1 1238 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 KCTD21Q4G0X4 260 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SLC45A4Q5BKX6 768 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TNFAIP8L3Q5GJ75 292 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TOR2AQ5JU69 321 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 DGKKQ5KSL6 1271 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 FAM102BQ5T8I3 360 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ATAD3BQ5T9A4 648 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RESP18Q5W5W9 173 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CENPPQ6IPU0 288 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RETSATQ6NUM9 610 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 C3orf33Q6P1S2 294 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 EMBQ6PCB8 327 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 LHFPL2Q6ZUX7 228 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SEM1Q6ZVN7 128 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ASRGL1Q7L266 308 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TAS2R42Q7RTR8 314 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ASCL5Q7RTU5 278 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ANKRD33Q7Z3H0 272 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SETD3Q86TU7 594 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RCOR2Q8IZ40 523 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ADGRG5Q8IZF4 528 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ADGRF2Q8IZF7 708 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 IQCKQ8N0W5 287 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ADSSL1Q8N142 457 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms