RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 CFAP57Q96MR6 1250 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 TRAF4Q9BUZ4 470 aaPredicted RBP4.85□□□□□ -1.63
CHD8-207ENST00000554384 WNT5BQ9H1J7 359 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 EVA1AQ9H8M9 152 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 SLC38A7Q9NVC3 462 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 AFF2P51816 1311 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 PLCH2O75038 1416 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 NPHP4O75161 1426 aaPredicted RBP4.85□□□□□ -1.63
CHD8-207ENST00000554384 NEURL4Q96JN8 1562 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 MYO3AQ8NEV4 1616 aa4.85□□□□□ -1.63
CHD8-207ENST00000554384 RNF17Q9BXT8 1623 aaKnown RBP4.85□□□□□ -1.63
CHD8-207ENST00000554384 GOLGA3Q08378 1498 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 CDK12Q9NYV4 1490 aaPredicted RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 SOS1Q07889 1333 aaPredicted RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 A0A1W2PRQ8 180 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 SMTNL1A8MU46 457 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 BUD23O43709 281 aaKnown RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 TSPAN1O60635 241 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 CTSVO60911 334 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 ACSL3O95573 720 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 LDLRP01130 860 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 SNRNP70P08621 437 aaKnown RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 FGF3P11487 239 aaPredicted RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 CSF2RAP15509 400 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 ERCC2P18074 760 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 PTAFRP25105 342 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 TKTP29401 623 aaKnown RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 CCKARP32238 428 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 PCGF2P35227 344 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 NPY4RP50391 375 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 ROR1Q01973 937 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 MZT1Q08AG7 82 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 NR1D2Q14995 579 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 DUOXA1Q1HG43 343 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 ALDH1L2Q3SY69 923 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 MDH1BQ5I0G3 518 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 KRT39Q6A163 491 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 SPSB3Q6PJ21 355 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 PACS1Q6VY07 963 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 PPP1R21Q6ZMI0 780 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 ZNF771Q7L3S4 317 aaPredicted RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 CCDC186Q7Z3E2 898 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 GALNTL5Q7Z4T8 443 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 KRT77Q7Z794 578 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 COMMD2Q86X83 199 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 RDM1Q8NG50 284 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 RNF128Q8TEB7 428 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 CD101Q93033 1021 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 C17orf77Q96MU5 243 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 LMF2Q9BU23 707 aaKnown RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 B3GAT1Q9P2W7 334 aa4.84□□□□□ -1.63
CHD8-207ENST00000554384 FAF1Q9UNN5 650 aaPredicted RBP4.84□□□□□ -1.63
CHD8-207ENST00000554384 CFAP74Q9C0B2 1584 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 C15orf62A8K5M9 175 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 CAPN9O14815 690 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 QDPRP09417 244 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 FDPSP14324 419 aaKnown RBP4.83□□□□□ -1.64
CHD8-207ENST00000554384 MSH3P20585 1137 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 FMO5P49326 533 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 ZNF75DP51815 510 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 MLLT10P55197 1068 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 PTPRCAPQ14761 206 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 HYAL4Q2M3T9 481 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 DCLRE1AQ6PJP8 1040 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 BHLHA9Q7RTU4 235 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 DEFB132Q7Z7B7 95 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 ZNF843Q8N446 348 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 CPSF7Q8N684 471 aaKnown RBP4.83□□□□□ -1.64
CHD8-207ENST00000554384 PAPD5Q8NDF8 572 aaKnown RBP4.83□□□□□ -1.64
CHD8-207ENST00000554384 OR13J1Q8NGT2 312 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 MOSPD2Q8NHP6 518 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 FGFBP3Q8TAT2 258 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 SYN2Q92777 582 aaPredicted RBP4.83□□□□□ -1.64
CHD8-207ENST00000554384 SLAMF9Q96A28 289 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 OTUB1Q96FW1 271 aaPredicted RBP4.83□□□□□ -1.64
CHD8-207ENST00000554384 SFXN2Q96NB2 322 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 DUX5Q96PT3 197 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 MEIS3Q99687 375 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 VN1R1Q9GZP7 353 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 PIH1D3Q9NQM4 214 aaKnown RBP4.83□□□□□ -1.64
CHD8-207ENST00000554384 ABCF3Q9NUQ8 709 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 LIPGQ9Y5X9 500 aa4.83□□□□□ -1.64
CHD8-207ENST00000554384 DIP2CQ9Y2E4 1556 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 AGLP35573 1532 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 A2ML1A8K2U0 1454 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 DVL1O14640 695 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 PTGESO14684 152 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 XPNPEP2O43895 674 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 ATP5BP06576 529 aaKnown RBP4.82□□□□□ -1.64
CHD8-207ENST00000554384 H1F0P07305 194 aaKnown RBP4.82□□□□□ -1.64
CHD8-207ENST00000554384 IFNAR1P17181 557 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 DGKAP23743 735 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 EPHA2P29317 976 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 PRKCIP41743 596 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 MTHFRP42898 656 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 MAPK12P53778 367 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 C1QTNF8P60827 252 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 POLR2LP62875 67 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms