RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PCYOX1Q9UHG3 505 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 POLG2Q9UHN1 485 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 PCDHGA4Q9Y5G9 962 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
SHMT2-211ENST00000554310 CFAP46Q8IYW2 2715 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 SPTA1P02549 2419 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 GSAPA4D1B5 854 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 H3BMM5 538 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 GOLGA8MH3BSY2 632 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ERVH48-1M5A8F1 160 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 BTN3A1O00481 513 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 KPNA5O15131 536 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ATXN7O15265 892 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 EFSO43281 561 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 GPC4O75487 556 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 DLGAP3O95886 979 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 RPN2P04844 631 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 FGF5P12034 268 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 POLR2CP19387 275 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 MAP4P27816 1152 aaKnown RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 KPNA2P52292 529 aaKnown RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ADARP55265 1226 aaKnown RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 EIF3BP55884 814 aaKnown RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 HSD11B2P80365 405 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ACY1Q03154 408 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 HSPA14Q0VDF9 509 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 RNASEH2BQ5TBB1 312 aaKnown RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 CES3Q6UWW8 571 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 HOOK3Q86VS8 718 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 BPHLQ86WA6 291 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 AMIGO1Q86WK6 493 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 PPP1R3BQ86XI6 285 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 D2HGDHQ8N465 521 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ESX1Q8N693 406 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ZSCAN1Q8NBB4 408 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 PHC3Q8NDX5 983 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 OR5AR1Q8NGP9 310 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 LPGAT1Q92604 370 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 KIAA1143Q96AT1 154 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ZNF669Q96BR6 464 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 PITPNM3Q9BZ71 974 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 PDE7BQ9NP56 450 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 C1GALT1Q9NS00 363 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ASIC3Q9UHC3 531 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 NFU1Q9UMS0 254 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 ICKQ9UPZ9 632 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 CDYLQ9Y232 598 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 BTRCQ9Y297 605 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 LOC400499M0QZD8 3231 aa12.68□□□□□ -0.38
SHMT2-211ENST00000554310 SMG1Q96Q15 3661 aaKnown RBP12.68□□□□□ -0.38
SHMT2-211ENST00000554310 TLN1Q9Y490 2541 aaKnown RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 C2orf74A8MZ97 194 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 H3BQF6 201 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 BTN3A3O00478 584 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 DNALI1O14645 258 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 USP1O94782 785 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 SLCO2B1O94956 709 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 ESR1P03372 595 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 EBLN1P0CF75 366 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 ITGB6P18564 788 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 CDH3P22223 829 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 AOAHP28039 575 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 CSE1LP55060 971 aaKnown RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 DR1Q01658 176 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 ABHD18Q0P651 414 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 PRKG2Q13237 762 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 SRSF6Q13247 344 aaKnown RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 ANKRD20A4Q4UJ75 823 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 SOWAHCQ53LP3 525 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 HSP90B2PQ58FF3 399 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 TMTC4Q5T4D3 741 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 UNC5DQ6UXZ4 953 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 NAPRTQ6XQN6 538 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 SYDE1Q6ZW31 735 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 PCGF5Q86SE9 256 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 TMEM135Q86UB9 458 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 RASGRP3Q8IV61 690 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 LMNTD2Q8IXW0 634 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 GSDMBQ8TAX9 411 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 WBP1Q96G27 269 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 BBC3Q96PG8 261 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 FCRL4Q96PJ5 515 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 EFHD1Q9BUP0 239 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 FGF21Q9NSA1 209 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 INTS10Q9NVR2 710 aaKnown RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 SOHLH2Q9NX45 425 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 OR6C2Q9NZP2 312 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 RARRES3Q9UL19 164 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 UTP11Q9Y3A2 253 aaKnown RBP12.67□□□□□ -0.38
SHMT2-211ENST00000554310 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 KALRNO60229 2985 aa12.67□□□□□ -0.38
SHMT2-211ENST00000554310 ZCWPW2A0A1B0GU75 182 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 ESYT3A0FGR9 886 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 IQCF5A8MTL0 148 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 GOLGA8TH3BQL2 631 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms