RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CEP76Q8TAP6 659 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 GPBAR1Q8TDU6 330 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PIGKQ92643 395 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 NELL1Q92832 810 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ATP6V1E2Q96A05 226 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 CXorf40BQ96DE9 158 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 L3HYPDHQ96EM0 354 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 GATA5Q9BWX5 397 aaPredicted RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ZDHHC5Q9C0B5 715 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 DRC3Q9H069 523 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ILKAPQ9H0C8 392 aaPredicted RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 EPN3Q9H201 632 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 MVB12BQ9H7P6 319 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 IMP3Q9NV31 184 aaKnown RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PSD3Q9NYI0 1048 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 OPTCQ9UBM4 332 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 RAB23Q9ULC3 237 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 STK38LQ9Y2H1 464 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 TDRKHQ9Y2W6 561 aaKnown RBP10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 PLEKHM1Q9Y4G2 1056 aa10.2□□□□□ -0.78
TMEM55B-205ENST00000554028 ARHGEF33A8MVX0 844 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PRR33A8MZF0 331 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 DFNA5O60443 496 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 CCNT2O60583 730 aaKnown RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 KATNA1O75449 491 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 STK16O75716 305 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 TROVE2P10155 538 aaKnown RBP eCLIP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 F3P13726 295 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 NME1P15531 152 aaKnown RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 AK4P27144 223 aaPredicted RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 ARRB1P49407 418 aaPredicted RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PRKAA1Q13131 559 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 RCN2Q14257 317 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PCBP2Q15366 365 aaKnown RBP eCLIP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 DUOXA1Q1HG43 343 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PRRT3Q5FWE3 981 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 ZC3H14Q6PJT7 736 aaKnown RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 FAM47EQ6ZV65 393 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 SPATS2Q86XZ4 545 aaKnown RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 WDR75Q8IWA0 830 aaKnown RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 TRIM48Q8IWZ4 208 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 LRRC34Q8IZ02 419 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 AVL9Q8NBF6 648 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 ZBTB44Q8NCP5 570 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 OR5K2Q8NHB8 316 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 LMX1AQ8TE12 382 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 DLG3Q92796 817 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 RHBDF1Q96CC6 855 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 FBXL8Q96CD0 374 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 RMDN2Q96LZ7 410 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 C7orf26Q96N11 449 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 TMEM237Q96Q45 408 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 INSM2Q96T92 566 aaPredicted RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 RAB11FIP5Q9BXF6 653 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 CD244Q9BZW8 370 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 FAM107BQ9H098 131 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 STN1Q9H668 368 aaKnown RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 ERVMER34-1Q9H9K5 563 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PRDM8Q9NQV8 689 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 TBC1D29Q9UFV1 150 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PTBP2Q9UKA9 531 aaKnown RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PILRBQ9UKJ0 227 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PCOLCE2Q9UKZ9 415 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 NUMA1Q14980 2115 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 LRRK1Q38SD2 2015 aa10.19□□□□□ -0.78
TMEM55B-205ENST00000554028 PLXNB3Q9ULL4 1909 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 KIR2DS5A0A0G2JLQ3 304 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 A0A0G2JNG1 304 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 A0A1B0GVT2 93 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 FAM86C2PA6NEL3 165 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 SLCO1B7G3V0H7 640 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 K7EPI3 171 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 KIR2DS3K7RE56 304 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 GPR37L1O60883 481 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 CRCPO75575 148 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 ANXA6P08133 673 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 MTHFD1P11586 935 aaKnown RBP10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 EPB42P16452 691 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 CCND1P24385 295 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 GGT5P36269 586 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 ARL1P40616 181 aaPredicted RBP10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 BDKRB1P46663 353 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 HSPA7P48741 367 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 HK2P52789 917 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 SEC24CP53992 1094 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 CLCQ05315 142 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 GALNT1Q10472 559 aaPredicted RBP10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 PRKG2Q13237 762 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 BIRC2Q13490 618 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 KIR2DS5Q14953 304 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 ARHGAP19Q14CB8 494 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 TCEA2Q15560 299 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 RPE65Q16518 533 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 RBBP7Q16576 425 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 UNC50Q53HI1 259 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 ARL13AQ5H913 290 aaPredicted RBP10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 AGTRAPQ6RW13 159 aa10.18□□□□□ -0.78
TMEM55B-205ENST00000554028 LAYNQ6UX15 382 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms