RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CD48P09326 243 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 PYGMP11217 842 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 MSH3P20585 1137 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 ITGAXP20702 1163 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 SOX11P35716 441 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 FKBP15Q5T1M5 1219 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 ZDHHC20Q5W0Z9 365 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 CCDC70Q6NSX1 233 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 Q6ZPB1 254 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-204ENST00000553605 TTLL10Q6ZVT0 673 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 CCNYQ8ND76 341 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 OR52E1Q8NGJ3 308 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 SUN3Q8TAQ9 357 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 BRIX1Q8TDN6 353 aaKnown RBP13.26□□□□□ -0.29
PRPF39-204ENST00000553605 DLG3Q92796 817 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 SLC26A1Q9H2B4 701 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 XKR8Q9H6D3 395 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 CCM2LQ9NUG4 571 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-204ENST00000553605 FANCLQ9NW38 375 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRPF39-204ENST00000553605 NXT1Q9UKK6 140 aaKnown RBP13.26□□□□□ -0.29
PRPF39-204ENST00000553605 A0A1B0GX78 115 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 BHMG1C9JSJ3 638 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-204ENST00000553605 KCNK1O00180 336 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 GADD45BO75293 160 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-204ENST00000553605 MYBL2P10244 700 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 AKT1P31749 480 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 SPAM1P38567 509 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 ARSFP54793 590 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 CCDC183Q5T5S1 534 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 SARM1Q6SZW1 724 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 FAM151BQ6UXP7 276 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 NT5DC3Q86UY8 548 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 LILRA3Q8N6C8 439 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-204ENST00000553605 SIRT6Q8N6T7 355 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 DNAAF3Q8N9W5 541 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 PHC3Q8NDX5 983 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-204ENST00000553605 NAT14Q8WUY8 206 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 SDCCAG3Q96C92 435 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 IMP4Q96G21 291 aaKnown RBP13.25□□□□□ -0.29
PRPF39-204ENST00000553605 LINC00615Q96LM1 132 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-204ENST00000553605 MESP1Q9BRJ9 268 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 PLCL2Q9UPR0 1127 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 SCINQ9Y6U3 715 aa13.25□□□□□ -0.29
PRPF39-204ENST00000553605 GLYATL1P3A0A0U1RQE8 302 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 FOXO6A8MYZ6 492 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 PRAMEF1O95521 474 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 NDST3O95803 873 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 WDPCPO95876 746 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 FTLP02792 175 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-204ENST00000553605 CCDC172P0C7W6 258 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 PRR35P0CG20 571 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 ACPPP15309 386 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 UGT2B7P16662 529 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 IGFBP2P18065 325 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 MX2P20592 715 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 FDXRP22570 491 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 PMP22Q01453 160 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 ZBTB17Q13105 803 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 ITGA9Q13797 1035 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 SKOR2Q2VWA4 1001 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-204ENST00000553605 KRTCAP3Q53RY4 240 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 FAM182AQ5T1J6 154 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 COX15Q7KZN9 410 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 DAAM2Q86T65 1068 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 DNAJC22Q8N4W6 341 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 FAM71BQ8TC56 605 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 DENND1AQ8TEH3 1009 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 PHF10Q8WUB8 498 aaKnown RBP13.24□□□□□ -0.29
PRPF39-204ENST00000553605 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.24□□□□□ -0.29
PRPF39-204ENST00000553605 NINJ1Q92982 152 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 OR2A14Q96R47 310 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 ZNF559Q9BR84 538 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 MRPL47Q9HD33 250 aaKnown RBP13.24□□□□□ -0.29
PRPF39-204ENST00000553605 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
PRPF39-204ENST00000553605 VSTM2BA6NLU5 285 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 MAP2K7O14733 419 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 UQCRHP07919 91 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 TPM2P07951 284 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 FERP16591 822 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 GCGRP47871 477 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 CARSP49589 748 aaKnown RBP13.23□□□□□ -0.29
PRPF39-204ENST00000553605 IFI35P80217 286 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-204ENST00000553605 SLC25A11Q02978 314 aaKnown RBP13.23□□□□□ -0.29
PRPF39-204ENST00000553605 GBE1Q04446 702 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 FOLH1Q04609 750 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 CACNG1Q06432 222 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 PRKG2Q13237 762 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 PIGHQ14442 188 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-204ENST00000553605 BCL7AQ4VC05 210 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 CES4AQ5XG92 561 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 Q71RC1 249 aaPredicted RBP13.23□□□□□ -0.29
PRPF39-204ENST00000553605 TADA1Q96BN2 335 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 C8orf44Q96CB5 159 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 GPR137Q96N19 417 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 SYT11Q9BT88 431 aa13.23□□□□□ -0.29
PRPF39-204ENST00000553605 CRB3Q9BUF7 120 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms