RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PYCR2Q96C36 320 aa19.07■□□□□ 0.64
RBFOX1-215ENST00000553186 FOPNLQ96NB1 174 aa19.07■□□□□ 0.64
RBFOX1-215ENST00000553186 BTBD10Q9BSF8 475 aa19.07■□□□□ 0.64
RBFOX1-215ENST00000553186 TBC1D10AQ9BXI6 508 aa19.07■□□□□ 0.64
RBFOX1-215ENST00000553186 OR52A5Q9H2C5 316 aa19.07■□□□□ 0.64
RBFOX1-215ENST00000553186 POLG2Q9UHN1 485 aa19.07■□□□□ 0.64
RBFOX1-215ENST00000553186 DNMT3AQ9Y6K1 912 aaPredicted RBP19.07■□□□□ 0.64
RBFOX1-215ENST00000553186 KATNA1O75449 491 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 C1orf105O95561 183 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 KRT16P08779 473 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 PIK3CGP48736 1102 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 CCR3P51677 355 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 TMEM31Q5JXX7 168 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 METTL6Q8TCB7 284 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 HMGB4Q8WW32 186 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 CCDC138Q96M89 665 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 ITM2CQ9NQX7 267 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 USP36Q9P275 1121 aaKnown RBP19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 C10orf142B7Z368 130 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 UBDO15205 165 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 CHEK2O96017 543 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 PIK3R1P27986 724 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 PRDX6P30041 224 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 RPA4Q13156 261 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 PUS10Q3MIT2 529 aaKnown RBP19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 TRIM69Q86WT6 500 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 SPDYE1Q8NFV5 336 aaPredicted RBP19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 CMTM5Q96DZ9 223 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 PKP4Q99569 1192 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 BTBD1Q9H0C5 482 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 ATG10Q9H0Y0 220 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 SLC17A4Q9Y2C5 497 aa19.06■□□□□ 0.64
RBFOX1-215ENST00000553186 B2RBV5 119 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 WDR47O94967 919 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 CEACAM5P06731 702 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 ALDOCP09972 364 aaKnown RBP19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 EBLN1P0CF75 366 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 PRR35P0CG20 571 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 ARL1P40616 181 aaPredicted RBP19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 MAGEA9P43362 315 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 PFN3P60673 137 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 PRKCQQ04759 706 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 CHCHD4Q8N4Q1 142 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 OR2T34Q8NGX1 318 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 MYOCQ99972 504 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 APOOQ9BUR5 198 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 ZDHHC5Q9C0B5 715 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 C2orf42Q9NWW7 574 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 STOX2Q9P2F5 926 aaPredicted RBP19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 GIMAP2Q9UG22 337 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 SLC22A14Q9Y267 594 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 LOC100653049A0A140TA62 436 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 CHURC1-FNTBB4DL54 471 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 H0YHG0 523 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 KMOO15229 486 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 KRT34O76011 436 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 SLC16A8O95907 504 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 DGKEP52429 567 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 FZD5Q13467 585 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 GAS6Q14393 721 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 GRB7Q14451 532 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 METRNLQ641Q3 311 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 SCIMPQ6UWF3 145 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 SYT13Q7L8C5 426 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 RBM15BQ8NDT2 890 aaKnown RBP19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 TUBGCP3Q96CW5 907 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 CCT7Q99832 543 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 LMAN1LQ9HAT1 526 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 ZNHIT2Q9UHR6 403 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 RNF11Q9Y3C5 154 aa19.05■□□□□ 0.64
RBFOX1-215ENST00000553186 KRBA1A5PL33 1030 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 POM121BA6NF01 834 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 COX4I1P13073 169 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 HGFP14210 728 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 IMPA1P29218 277 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 HTR6P50406 440 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 PRPF38BQ5VTL8 546 aaKnown RBP19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 SYNPOQ8N3V7 929 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 OR2T11Q8NH01 316 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 HMGCLL1Q8TB92 370 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 ATL1Q8WXF7 558 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 CADM1Q9BY67 442 aaKnown RBP19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 SLC40A1Q9NP59 571 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 POLMQ9NP87 494 aaPredicted RBP19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 INTS7Q9NVH2 962 aaKnown RBP19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 CIDEBQ9UHD4 219 aa19.04■□□□□ 0.64
RBFOX1-215ENST00000553186 GYG2O15488 501 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 VPS4BO75351 444 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 IGLV3-19P01714 112 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 ITPKAP23677 461 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 AGTRAPQ6RW13 159 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 Q6ZSR9 355 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 PDZD3Q86UT5 571 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 KLHDC8AQ8IYD2 350 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 DENND6BQ8NEG7 585 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 SGK2Q9HBY8 427 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 DNAJC11Q9NVH1 559 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 TRPS1Q9UHF7 1281 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 LRRC72A6NJI9 287 aa19.03■□□□□ 0.64
RBFOX1-215ENST00000553186 PRAMEF4O60810 478 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms