RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 NFS1Q9Y697 457 aa16.75■□□□□ 0.27
ITGA5-213ENST00000553071 GOLGA4Q13439 2230 aaKnown RBP16.75■□□□□ 0.27
ITGA5-213ENST00000553071 WDR87Q6ZQQ6 2873 aa16.75■□□□□ 0.27
ITGA5-213ENST00000553071 LY6G6EA0A0G2JKS1 128 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 SMIM23A6NLE4 172 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 MATN2O00339 956 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 WISP3O95389 354 aaPredicted RBP16.74■□□□□ 0.27
ITGA5-213ENST00000553071 ALDH4A1P30038 563 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 SHMT2P34897 504 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 AP1S2P56377 157 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 SQSTM1Q13501 440 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 GPR18Q14330 331 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 CASP8Q14790 479 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 ARHGAP19Q14CB8 494 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 ACAP2Q15057 778 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 KRT71Q3SY84 523 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 GUSBP11Q6P575 273 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 TMEM207Q6UWW9 146 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 PIWIL4Q7Z3Z4 852 aaKnown RBP16.74■□□□□ 0.27
ITGA5-213ENST00000553071 CMC1Q7Z7K0 106 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 DEFB124Q8NES8 71 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 OR5AR1Q8NGP9 310 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 OR2W6PQ8NHA6 318 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 STAG3L4Q8TBR4 150 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 EPS8L3Q8TE67 593 aaKnown RBP16.74■□□□□ 0.27
ITGA5-213ENST00000553071 CCDC74AQ96AQ1 378 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 VPS11Q9H270 941 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 OR6C2Q9NZP2 312 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 SENP1Q9P0U3 644 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 LGALS13Q9UHV8 139 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 TDRKHQ9Y2W6 561 aaKnown RBP16.74■□□□□ 0.27
ITGA5-213ENST00000553071 U3KQA8 63 aa16.74■□□□□ 0.27
ITGA5-213ENST00000553071 COL5A1P20908 1838 aaPredicted RBP16.74■□□□□ 0.27
ITGA5-213ENST00000553071 LAMA1P25391 3075 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 UQCRHLA0A096LP55 91 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 DUX1O43812 170 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 RFPL3O75679 317 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 KLHL2O95198 593 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 UQCRHP07919 91 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 GSTA1P08263 222 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 MYZAPP0CAP1 466 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 AMD1P17707 334 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ACADVLP49748 655 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 CSRP3P50461 194 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 PRKAA1Q13131 559 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 PRKG2Q13237 762 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 CSHL1Q14406 222 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ZNF460Q14592 562 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 CDKL4Q5MAI5 379 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ARMC6Q6NXE6 501 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 RASGRP3Q8IV61 690 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 OR9A1PQ8NGU1 263 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ANKRD49Q8WVL7 239 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ATL1Q8WXF7 558 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 KIAA1191Q96A73 305 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 SLC22A18Q96BI1 424 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 CCDC138Q96M89 665 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ZIM3Q96PE6 472 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 CCDC3Q9BQI4 270 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 HGH1Q9BTY7 390 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 SRMSQ9H3Y6 488 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 VIPAS39Q9H9C1 493 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 RDH14Q9HBH5 336 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 DCDC2Q9UHG0 476 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ENTPD2Q9Y5L3 495 aa16.73■□□□□ 0.27
ITGA5-213ENST00000553071 ZFC3H1O60293 1989 aaKnown RBP16.73■□□□□ 0.27
ITGA5-213ENST00000553071 SYCE1LA8MT33 242 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 MYO1CO00159 1063 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 BTN3A1O00481 513 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 RGS16O15492 202 aaPredicted RBP16.72■□□□□ 0.27
ITGA5-213ENST00000553071 RFPL1O75677 317 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 UBXN7O94888 489 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 RBP1P09455 135 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 CD1DP15813 335 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 CCT5P48643 541 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 PPM1FP49593 454 aaPredicted RBP16.72■□□□□ 0.27
ITGA5-213ENST00000553071 RAB28P51157 221 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 NOVA1P51513 510 aaKnown RBP16.72■□□□□ 0.27
ITGA5-213ENST00000553071 ZNF844Q08AG5 666 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 CEP85LQ5SZL2 805 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 FRA10AC1Q70Z53 315 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 SPRED1Q7Z699 444 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 AMIGO1Q86WK6 493 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 OOSP2Q86WS3 158 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 SFTPA2Q8IWL1 248 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 OR52E1Q8NGJ3 308 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 RHEBL1Q8TAI7 183 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 RAB33BQ9H082 229 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 EURLQ9NYK6 297 aa16.72■□□□□ 0.27
ITGA5-213ENST00000553071 RUVBL2Q9Y230 463 aaKnown RBP16.72■□□□□ 0.27
ITGA5-213ENST00000553071 IGHV1OR21-1A0A087WYE8 117 aa16.71■□□□□ 0.27
ITGA5-213ENST00000553071 PCNX2A6NKB5 2137 aa16.71■□□□□ 0.27
ITGA5-213ENST00000553071 ARHGEF33A8MVX0 844 aa16.71■□□□□ 0.27
ITGA5-213ENST00000553071 PROS1P07225 676 aa16.71■□□□□ 0.27
ITGA5-213ENST00000553071 HNMTP50135 292 aa16.71■□□□□ 0.27
ITGA5-213ENST00000553071 SIM1P81133 766 aaPredicted RBP16.71■□□□□ 0.27
ITGA5-213ENST00000553071 CDKL1Q00532 357 aa16.71■□□□□ 0.27
ITGA5-213ENST00000553071 PUM1Q14671 1186 aaKnown RBP eCLIP16.71■□□□□ 0.272e-6■■□□□ 14.5
ITGA5-213ENST00000553071 ANKS6Q68DC2 871 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms