RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SYN2Q92777 582 aaPredicted RBP3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 PIGTQ969N2 578 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 DHX58Q96C10 678 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 KLHL5Q96PQ7 755 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 PRAM1Q96QH2 718 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 GAL3ST4Q96RP7 486 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 SLX1AQ9BQ83 275 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 P2RY12Q9H244 342 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 C1orf21Q9H246 121 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 HSD3B7Q9H2F3 369 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 EBF3Q9H4W6 596 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 HPF1Q9NWY4 346 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 B3GAT1Q9P2W7 334 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 FBXW2Q9UKT8 454 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 MTUS1Q9ULD2 1270 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 AGTPBP1Q9UPW5 1226 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 HS3ST3B1Q9Y662 390 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 COX11Q9Y6N1 276 aa3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 DHX29Q7Z478 1369 aaKnown RBP3.87□□□□□ -1.79
LSM6P2-201ENST00000552208 IGLV5-39A0A0G2JS06 123 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 A0A0U1RQJ8 604 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ELOVL7A1L3X0 281 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 MAGEA13PA6NCF6 341 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 C5orf51A6NDU8 294 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 C5orf60A6NFR6 353 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 INAFM1C9JVW0 142 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 FLRT2O43155 660 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ATP6AP2O75787 350 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 STAM2O75886 525 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PLGP00747 810 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ANKRD34CP0C6C1 535 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 SMIM18P0DKX4 95 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PRF1P14222 555 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 HOXB2P14652 356 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 EPORP19235 508 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 SSTR2P30874 369 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 HPDP32754 393 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 CTNNB1P35222 781 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ACVRL1P37023 503 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 HSD17B3P37058 310 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 RFX2P48378 723 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ENTPD1P49961 510 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 LUMP51884 338 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 EVCP57679 992 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 GSDMDP57764 484 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PDE1BQ01064 536 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PLA2G7Q13093 441 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 TRA2AQ13595 282 aaKnown RBP eCLIP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 RBMS2Q15434 407 aaKnown RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 NPTX1Q15818 432 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 CTU2Q2VPK5 515 aaKnown RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 LACTB2Q53H82 288 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 TOR1AIP1Q5JTV8 583 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PRSS42Q7Z5A4 293 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PIGWQ7Z7B1 504 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 EXOC3L1Q86VI1 746 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 CCDC83Q8IWF9 413 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 DNAJC10Q8IXB1 793 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 LMNTD2Q8IXW0 634 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 APCDD1Q8J025 514 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ARL6IP6Q8N6S5 226 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ZNF548Q8NEK5 533 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 OR14A16Q8NHC5 309 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 NCOA7Q8NI08 942 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PSMA8Q8TAA3 256 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 VANGL1Q8TAA9 524 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 TAF4BQ92750 862 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 DAZLQ92904 295 aaKnown RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ABTB1Q969K4 478 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 MTERF3Q96E29 417 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 RUNDC3BQ96NL0 473 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 FSD1Q9BTV5 496 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 SLC2A11Q9BYW1 496 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 LSG1Q9H089 658 aaKnown RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ABCG4Q9H172 646 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 Q9H8V8 135 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PRMT8Q9NR22 394 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 SERINC1Q9NRX5 453 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 ZNF701Q9NV72 531 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 TMEM30AQ9NV96 361 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 HMG20BQ9P0W2 317 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 TMCC3Q9ULS5 477 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 GPR132Q9UNW8 380 aa3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 PIN4Q9Y237 131 aaKnown RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 RPH3AQ9Y2J0 694 aaPredicted RBP3.86□□□□□ -1.79
LSM6P2-201ENST00000552208 POLR2AP24928 1970 aaKnown RBP3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 LY6G6EA0A0G2JKS1 128 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 TEX13DA0A0J9YY54 714 aaPredicted RBP3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 C13orf42A0A1B0GVH6 325 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 A0A1B0GVT2 93 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 A0A1W2PPW3 197 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 HYKKA2RU49 373 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 OR5K3A6NET4 321 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 CASTOR2A6NHX0 329 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 LILRA5A6NI73 299 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 PRR32B1ATL7 298 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 TMEM178BH3BS89 294 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 CTDSPLO15194 276 aa3.85□□□□□ -1.79
LSM6P2-201ENST00000552208 MID1O15344 667 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms