RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GSTM1P09488 218 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 EDN3P14138 238 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 UGT2B7P16662 529 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 SHMT2P34897 504 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 GSTM4Q03013 218 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 DEFB110Q30KQ9 67 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 GPR33Q49SQ1 333 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 NKAIN1Q4KMZ8 207 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 TFDP3Q5H9I0 405 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 AGAP7PQ5VUJ5 663 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 MRPL14Q6P1L8 145 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 TLDC1Q6P9B6 456 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 TRIM73Q86UV7 250 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 LUZP1Q86V48 1076 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 KCNMB4Q86W47 210 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 ZNF655Q8N720 491 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 AGAP4Q96P64 663 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 NRTNQ99748 197 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 C19orf43Q9BQ61 176 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 GBA3Q9H227 469 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 FAM96AQ9H5X1 160 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 ZBTB20Q9HC78 741 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 FAM60AQ9NP50 221 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 ZDHHC3Q9NYG2 299 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 DHCR7Q9UBM7 475 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 NOVA2Q9UNW9 492 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 OSGIN2Q9Y236 505 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 AAR2Q9Y312 384 aaKnown RBP13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 FBN2P35556 2912 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 CNTRLQ7Z7A1 2325 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 A0A0J9YY10 115 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 H3BMH7 237 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 UMODP07911 640 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 COMTP21964 271 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 PDHA2P29803 388 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 ANP32AP39687 249 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 TSFMP43897 325 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 TMPRSS15P98073 1019 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 PRPSAP1Q14558 356 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 ZRSR2Q15696 482 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 HIF1AQ16665 826 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 B3GNTL1Q67FW5 361 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 RANBP10Q6VN20 620 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 OR8K1Q8NGG5 319 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 DNAJB14Q8TBM8 379 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 DENND1AQ8TEH3 1009 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 DLG3Q92796 817 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 LRRC45Q96CN5 670 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 HAUS1Q96CS2 278 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 DNAJC7Q99615 494 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 IFNKQ9P0W0 207 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 POLG2Q9UHN1 485 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 FBXL4Q9UKA2 621 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 ICKQ9UPZ9 632 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 HYOU1Q9Y4L1 999 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 SVILO95425 2214 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 DOCK10Q96BY6 2186 aa13.68□□□□□ -0.22
CHMP1A-210ENST00000551981 ZGRF1Q86YA3 2104 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 POLQO75417 2590 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 IGLV3-16A0A075B6K0 115 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 MASP2O00187 686 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 KDM1AO60341 852 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 CNOT3O75175 753 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 CHRM5P08912 532 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 PIM1P11309 404 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 MMP11P24347 488 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 MC4RP32245 332 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 ADRA1AP35348 466 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 GABRA4P48169 554 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 ZNF140P52738 457 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 CDC16Q13042 620 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 ZNF169Q14929 603 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 ZIC1Q15915 447 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 ZNF658BQ4V348 819 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 UNC5AQ6ZN44 842 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 FAR1Q8WVX9 515 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 FKBP10Q96AY3 582 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 VPS50Q96JG6 964 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 CCDC42Q96M95 316 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 PPP1R2P1Q96PQ5 205 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 OR2A14Q96R47 310 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 APOL2Q9BQE5 337 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 EPS8L2Q9H6S3 715 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 OR6C2Q9NZP2 312 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 CDC23Q9UJX2 597 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 PLCL2Q9UPR0 1127 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 ASF1AQ9Y294 204 aa13.67□□□□□ -0.22
CHMP1A-210ENST00000551981 hCG_1818297A0A087WSY0 165 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 A0A1B0GUH1 482 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 H7C0C1 242 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 E2F3O00716 465 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 LIN7AO14910 233 aaPredicted RBP13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 HCRTR1O43613 425 aa13.66□□□□□ -0.22
CHMP1A-210ENST00000551981 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms