RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 KIF19Q2TAC6 998 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 SGO1Q5FBB7 561 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 CDKL4Q5MAI5 379 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 TP53I13Q8NBR0 393 aaPredicted RBP19.2■□□□□ 0.66
SSH1-209ENST00000551165 NTMT1Q9BV86 223 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 FBP2O00757 339 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 PLRG1O43660 514 aaKnown RBP19.2■□□□□ 0.66
SSH1-209ENST00000551165 DRD1P21728 446 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 FAM131CQ96AQ9 280 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 MTFMTQ96DP5 389 aaKnown RBP19.2■□□□□ 0.66
SSH1-209ENST00000551165 TEX37Q96LM6 180 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 PKP4Q99569 1192 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 INTS7Q9NVH2 962 aaKnown RBP19.2■□□□□ 0.66
SSH1-209ENST00000551165 KLQ9UEF7 1012 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 VEGFDO43915 354 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 RNGTTO60942 597 aaKnown RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 MAP4P27816 1152 aaKnown RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 HMOX2P30519 316 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 RAP1GDS1P52306 607 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 PPP2CBP62714 309 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 PPP2CAP67775 309 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 TFF2Q03403 129 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 SMAD4Q13485 552 aaKnown RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 HERC3Q15034 1050 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 TRMT11Q7Z4G4 463 aaKnown RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 DSELQ8IZU8 1212 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 GAS2L1Q99501 681 aaPredicted RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 C1QTNF2Q9BXJ5 285 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 SLC16A8O95907 504 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 DPP6P42658 865 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 HNMTP50135 292 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 AP1S2P56377 157 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 CPSF6Q16630 551 aaKnown RBP eCLIP19.19■□□□□ 0.66
SSH1-209ENST00000551165 TMEM259Q4ZIN3 620 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 C6orf136Q5SQH8 315 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 NUDT8Q8WV74 236 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 FBXL8Q96CD0 374 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 SIPA1Q96FS4 1042 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 MRGPRX1Q96LB2 322 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 LINC00615Q96LM1 132 aaPredicted RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 TEX101Q9BY14 249 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 MMADHCQ9H3L0 296 aaPredicted RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 C8orf33Q9H7E9 229 aaPredicted RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 STOX2Q9P2F5 926 aaPredicted RBP19.19■□□□□ 0.66
SSH1-209ENST00000551165 GPR34Q9UPC5 381 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 CCL27Q9Y4X3 112 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 GPR45Q9Y5Y3 372 aa19.19■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3DA0A087WVF3 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3IA0A087WXS9 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3EA0A087X179 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3KA0A087X1G2 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3FA6NER0 549 aaPredicted RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3LB9A6J9 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 CHUKO15111 745 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 C1orf105O95561 183 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3HP0C7X1 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 RPS21P63220 83 aaKnown RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 SNCBQ16143 134 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3GQ6DHY5 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3CQ6IPX1 549 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBC1D3Q8IZP1 549 aaPredicted RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 OR2L2Q8NH16 312 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 NRTNQ99748 197 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 ACTR8Q9H981 624 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 NKX1-2Q9UD57 310 aaPredicted RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 PABPN1LA6NDY0 278 aaKnown RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 LIN7AO14910 233 aaPredicted RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 EBLN1P0CF75 366 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 IMPA1P29218 277 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 HMGCS1Q01581 520 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TBL3Q12788 808 aaKnown RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 CDC16Q13042 620 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 AGERQ15109 404 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 OGFOD2Q6N063 350 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 AGTRAPQ6RW13 159 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 LRRC70Q7Z2Q7 622 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 EFL1Q7Z2Z2 1120 aaKnown RBP19.18■□□□□ 0.66
SSH1-209ENST00000551165 TCAIMQ8N3R3 496 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 KYQ8NBH2 561 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 SLC17A9Q9BYT1 436 aa19.18■□□□□ 0.66
SSH1-209ENST00000551165 TMEM265A0A087WTH1 108 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 MGAT4DA6NG13 374 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 CATP04040 527 aaKnown RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 NDUFV2P19404 249 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 TRIM23P36406 574 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 ATP4BP51164 291 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 SGCGQ13326 291 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 NAE1Q13564 534 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 METTL2BQ6P1Q9 378 aaKnown RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 HPS6Q86YV9 775 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 FLCNQ8NFG4 579 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 KCNV2Q8TDN2 545 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 DNASE1L2Q92874 299 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 MED8Q96G25 268 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 OR4K3Q96R72 315 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 PHF7Q9BWX1 381 aaPredicted RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 WDR26Q9H7D7 661 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 SDR39U1Q9NRG7 319 aaPredicted RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 NDRG2Q9UN36 371 aaKnown RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 PSMD13Q9UNM6 376 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms