RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 IDH3AP50213 366 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 TMEM44Q2T9K0 475 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 OXR1Q8N573 874 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 PSMG2Q969U7 264 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 SLC35G5Q96KT7 338 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 TBC1D17Q9HA65 648 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 KNL1Q8NG31 2342 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 SLC1A2P43004 574 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 GPR151Q8TDV0 419 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 FCGR1BQ92637 280 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 ART5Q96L15 291 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 HNRNPABQ99729 332 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 FETUBQ9UGM5 382 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CCDC85CA6NKD9 419 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CAPN14A8MX76 684 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CXCR6O00574 342 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CCNKO75909 580 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 APOC1P02654 83 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 OR4Q2P0C623 313 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CAP1Q01518 475 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 SLC9B1Q4ZJI4 515 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 ALKBH4Q9NXW9 302 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 hCG_2039718K7EN88 272 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 AREL1O15033 823 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 ECHS1P30084 290 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 VWA5B1Q5TIE3 1220 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 PPP2R2DQ66LE6 453 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 PNLDC1Q8NA58 520 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 DNAJB8Q8NHS0 232 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 IFT27Q9BW83 186 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 WTIPA6NIX2 430 aaPredicted RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 SIRPGQ9P1W8 387 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 TESMINQ9Y4I5 508 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 FKBP7Q9Y680 259 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 WASP42768 502 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 TARDBPQ13148 414 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 RNF19BQ6ZMZ0 732 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 GFM1Q96RP9 751 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 NUSAP1Q9BXS6 441 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CICQ96RK0 1608 aaPredicted RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 IRAK2O43187 625 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 LINGO3P0C6S8 592 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 SEPHS1P49903 392 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 SLC1A5Q15758 541 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 ZNF554Q86TJ5 538 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 CLIP4Q8N3C7 705 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 TRNAU1APQ9NX07 287 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 RUVBL1Q9Y265 456 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 PEX16Q9Y5Y5 336 aa12.29□□□□□ -0.44
RAB3IP-212ENST00000550536 NFAT5O94916 1531 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 PIP5K1BO14986 540 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ARCN1P48444 511 aaKnown RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 RORCP51449 518 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 NFKB2Q00653 900 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 PRKD1Q15139 912 aaPredicted RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 TSTD2Q5T7W7 516 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 MOB2Q70IA6 237 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ZNF615Q8N8J6 731 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 INO80EQ8NBZ0 244 aaPredicted RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 C1orf109Q9NX04 203 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 PDE10AQ9Y233 779 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 C2CD4BA6NLJ0 364 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 A8MUI8 341 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 CASRP41180 1078 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 FOXM1Q08050 763 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ABCA11PQ4W5N1 156 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ZDHHC21Q8IVQ6 265 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 SLC22A18Q96BI1 424 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 PRORSD1PA6NEY8 169 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ZBTB46Q86UZ6 589 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 RGMAQ96B86 450 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 FAM129BQ96TA1 746 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 DBIP07108 87 aaKnown RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 AHCYP23526 432 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 MAT2AP31153 395 aaKnown RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 GAD2Q05329 585 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 SIM2Q14190 667 aaPredicted RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 INAVAQ3KP66 663 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 TDRPQ86YL5 185 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 CEP295NLQ96MC4 621 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ZSCAN5AQ9BUG6 496 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 MOCS1Q9NZB8 636 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 MEMO1Q9Y316 297 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ORC5O43913 435 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 RPLP0P05388 317 aaKnown RBP12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 ECT2LQ008S8 904 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 HGSNATQ68CP4 663 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 HDDC3Q8N4P3 179 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 BTBD19C9JJ37 291 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 PI15O43692 258 aa12.28□□□□□ -0.44
RAB3IP-212ENST00000550536 SRPRAP08240 638 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms