RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 LRRC45Q96CN5 670 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 COPS8Q99627 209 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 DPH2Q9BQC3 489 aaPredicted RBP7.4□□□□□ -1.22
NEK3-201ENST00000550331 TLR10Q9BXR5 811 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 NLNQ9BYT8 704 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 PITPNM3Q9BZ71 974 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 CHST8Q9H2A9 424 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 SRMSQ9H3Y6 488 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 TFB2MQ9H5Q4 396 aaKnown RBP7.4□□□□□ -1.22
NEK3-201ENST00000550331 COG4Q9H9E3 785 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 VPS37BQ9H9H4 285 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 G3BP2Q9UN86 482 aaKnown RBP7.4□□□□□ -1.22
NEK3-201ENST00000550331 SNX7Q9UNH6 387 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 ZNF451Q9Y4E5 1061 aa7.4□□□□□ -1.22
NEK3-201ENST00000550331 IGLV3-16A0A075B6K0 115 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 GSAPA4D1B5 854 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 SLC9B1P1A6NJY1 282 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 PJA2O43164 708 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 DPM1O60762 260 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 STK10O94804 968 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 TMEM63AO94886 807 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 GSTM1P09488 218 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 POLR2CP19387 275 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 CDH3P22223 829 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 PSMB4P28070 264 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 TNFRSF8P28908 595 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 PRDX3P30048 256 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 CTNNA1P35221 906 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 PTPN7P35236 360 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 PREPP48147 710 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ARCN1P48444 511 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 CCL11P51671 97 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 VAV2P52735 878 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 RRADP55042 308 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 OTUD4Q01804 1114 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 GSTM4Q03013 218 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ABRQ12979 859 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 CHAF1BQ13112 559 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 RPA4Q13156 261 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 TBX2Q13207 712 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 MSLNQ13421 630 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 NCF4Q15080 339 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 SPA17Q15506 151 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ZNF658BQ4V348 819 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 ZNF789Q5FWF6 425 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ANKRD20A2Q5SQ80 823 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 CCDC181Q5TID7 509 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ANKRD20A1Q5TYW2 823 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ANKRD20A3Q5VUR7 823 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 FAM198BQ6UWH4 519 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 MED25Q71SY5 747 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 MAMDC2Q7Z304 686 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 DAAM2Q86T65 1068 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 KLHDC8BQ8IXV7 354 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 SRRM1Q8IYB3 904 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 SYTL1Q8IYJ3 562 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 CCDC170Q8IYT3 715 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 LILRA3Q8N6C8 439 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 TMEM102Q8N9M5 508 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 OR1L3Q8NH93 324 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ACTL9Q8TC94 416 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 KRT35Q92764 455 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 CLIP3Q96DZ5 547 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 CALR3Q96L12 384 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 PPM1MQ96MI6 270 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 FERD3LQ96RJ6 166 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 DHRS4Q9BTZ2 278 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 HEMGNQ9BXL5 484 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 OR52A5Q9H2C5 316 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 MVB12BQ9H7P6 319 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ACTR5Q9H9F9 607 aaPredicted RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 ARNT2Q9HBZ2 717 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 LUC7LQ9NQ29 371 aaKnown RBP7.39□□□□□ -1.23
NEK3-201ENST00000550331 PCMTD2Q9NV79 361 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 SERTAD3Q9UJW9 196 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 PADI2Q9Y2J8 665 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 PCDHA13Q9Y5I0 950 aa7.39□□□□□ -1.23
NEK3-201ENST00000550331 ITPR3Q14573 2671 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 TRBV5-4A0A0C4DH59 114 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 CCDC66A2RUB6 948 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 C2orf74A8MZ97 194 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 TMEM150CB9EJG8 249 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 C9J4A7 227 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 E7EQ34 232 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 H7C0S8 307 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 IFRD1O00458 451 aaPredicted RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 BTN3A3O00478 584 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 BTN3A1O00481 513 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 KCNN4O15554 427 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 LDB2O43679 373 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 AP2A2O94973 939 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 DDAH2O95865 285 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 CAPN1P07384 714 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 HBQ1P09105 142 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 RBP3P10745 1247 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms