RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 BTRCQ9Y297 605 aa16.71■□□□□ 0.27
CHMP1A-208ENST00000550102 PIPSLA2A3N6 862 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 ERVH48-1M5A8F1 160 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 MAP3K7O43318 606 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 NIPSNAP2O75323 286 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 LIFP15018 202 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 PRDX3P30048 256 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 FMO4P31512 558 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 TUBB4BP68371 445 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 TUBB2AQ13885 445 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 MORF4L2Q15014 288 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 PLEKHS1Q5SXH7 462 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 SPESP1Q6UW49 350 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 CENPUQ71F23 418 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 BPHLQ86WA6 291 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 LMNTD2Q8IXW0 634 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 SKA2Q8WVK7 121 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 FCRL4Q96PJ5 515 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 NRTNQ99748 197 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 TRIM51Q9BSJ1 452 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 FAM167BQ9BTA0 163 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 NAT9Q9BTE0 207 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 TUBB2BQ9BVA1 445 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 GPN2Q9H9Y4 310 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 FANCEQ9HB96 536 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 C20orf96Q9NUD7 363 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 CRYL1Q9Y2S2 319 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 SPTBP11277 2137 aa16.7■□□□□ 0.26
CHMP1A-208ENST00000550102 SLC9B1P1A6NJY1 282 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 SMAPO00193 183 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 ATXN7O15265 892 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 TTI1O43156 1089 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 SPAG6O75602 509 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 KIAA0754O94854 1291 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 TTC4O95801 387 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 CHRM5P08912 532 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 ZNF28P17035 718 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 IVDP26440 423 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 ATP5DP30049 168 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 PKLRP30613 574 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 STAT5AP42229 794 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 SLC1A2P43004 574 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 ABHD18Q0P651 414 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 ABRQ12979 859 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 CRYMQ14894 314 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 FBXO38Q6PIJ6 1188 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 UNC5AQ6ZN44 842 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 TIPARPQ7Z3E1 657 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 C17orf53Q8N3J3 647 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 OR8K5Q8NH50 307 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 CFAP61Q8NHU2 1237 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 CCDC68Q9H2F9 335 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 PLAGL1Q9UM63 463 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 MRFAP1Q9Y605 127 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 CFAP46Q8IYW2 2715 aa16.69■□□□□ 0.26
CHMP1A-208ENST00000550102 E5RI56 91 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 S1PR4O95977 384 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 TPBGLP0DKB5 382 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 PKMP14618 531 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 ST6GAL1P15907 406 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 UGT2B7P16662 529 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 WT1P19544 449 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 RAB28P51157 221 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 ETF1P62495 437 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 DHX9Q08211 1270 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 GPR19Q15760 415 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 BBS9Q3SYG4 887 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 SOWAHCQ53LP3 525 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 KIAA1614Q5VZ46 1190 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 TTC23LQ6PF05 361 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 C6orf15Q6UXA7 325 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 KCNMB4Q86W47 210 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 DENND6AQ8IWF6 608 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 PDIK1LQ8N165 341 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 ZBTB2Q8N680 514 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 GALNT6Q8NCL4 622 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 GABPB2Q8TAK5 448 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 FAM136AQ96C01 138 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 SNF8Q96H20 258 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 FOPNLQ96NB1 174 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 BBC3Q96PG8 261 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 EBNA1BP2Q99848 306 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 EFHD1Q9BUP0 239 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 RAB11FIP5Q9BXF6 653 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 FAM169AQ9Y6X4 670 aa16.68■□□□□ 0.26
CHMP1A-208ENST00000550102 EIF4E1BA6NMX2 242 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 BANF1O75531 89 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 SEC31AO94979 1220 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 TIAF1O95411 115 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 MT-ND3P03897 115 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 MSL3P1P0C860 447 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 PVRP15151 417 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 CHRM3P20309 590 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 CASQ1P31415 396 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 CTBP1Q13363 440 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 GBX1Q14549 363 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 KIR2DS3Q14952 304 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 HIF1AQ16665 826 aa16.67■□□□□ 0.26
CHMP1A-208ENST00000550102 KYNUQ16719 465 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms