RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 SPHK1Q9NYA1 384 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 C5AR2Q9P296 337 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 CDYLQ9Y232 598 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 B3GNT3Q9Y2A9 372 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAB5C-205ENST00000550013 DOCK10Q96BY6 2186 aa14.89□□□□□ -0.03
RAB5C-205ENST00000550013 WIPF3A6NGB9 483 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 CBX6O95503 412 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 RBP3P10745 1247 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 FOLR3P41439 243 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 EIF3EP60228 445 aaKnown RBP14.88□□□□□ -0.03
RAB5C-205ENST00000550013 RPA4Q13156 261 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 SSPNQ14714 243 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 MYBPC3Q14896 1274 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 C11orf63Q6NUN7 778 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 ZNF449Q6P9G9 518 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 DARS2Q6PI48 645 aaKnown RBP14.88□□□□□ -0.03
RAB5C-205ENST00000550013 UNC5AQ6ZN44 842 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 HOOK3Q86VS8 718 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 PIANPQ8IYJ0 282 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 GALNT16Q8N428 558 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 CLEC1AQ8NC01 280 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 SPATA13Q96N96 652 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 GBP5Q96PP8 586 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 OR2A14Q96R47 310 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 RANBP9Q96S59 729 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 FERMT1Q9BQL6 677 aa14.88□□□□□ -0.03
RAB5C-205ENST00000550013 DHCR7Q9UBM7 475 aaKnown RBP14.88□□□□□ -0.03
RAB5C-205ENST00000550013 GPN3Q9UHW5 284 aaPredicted RBP14.88□□□□□ -0.03
RAB5C-205ENST00000550013 POLEQ07864 2286 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 CNTRLQ7Z7A1 2325 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 DIDO1Q9BTC0 2240 aaKnown RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 AKR1B15C9JRZ8 316 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 PJA2O43164 708 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 STK10O94804 968 aaKnown RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 CHRM5P08912 532 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 TPH1P17752 444 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 DCTP40126 519 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 BRD3Q15059 726 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 DBN1Q16643 649 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 RHBDD2Q6NTF9 364 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 PPP1R32Q7Z5V6 425 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 CNGA4Q8IV77 575 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 ZNF655Q8N720 491 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 FLVCR1-AS1Q8TAF5 88 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 FER1L6-AS2Q96M78 137 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 IP6K3Q96PC2 410 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 C19orf43Q9BQ61 176 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 OSBPL8Q9BZF1 889 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 ILKAPQ9H0C8 392 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 ZNF552Q9H707 407 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 ARNT2Q9HBZ2 717 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 ZBTB20Q9HC78 741 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 NLE1Q9NVX2 485 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 P4HTMQ9NXG6 502 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 SMARCAL1Q9NZC9 954 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 IFT80Q9P2H3 777 aaPredicted RBP14.87□□□□□ -0.03
RAB5C-205ENST00000550013 NDOR1Q9UHB4 597 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 PLAGL1Q9UM63 463 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 NTNG1Q9Y2I2 539 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 PRSS21Q9Y6M0 314 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 AP1M2Q9Y6Q5 423 aa14.87□□□□□ -0.03
RAB5C-205ENST00000550013 PEX12O00623 359 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 ZSCAN9O15535 394 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-205ENST00000550013 ALPPP05187 535 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 UMODP07911 640 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 TPBGLP0DKB5 382 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 CTNNA2P26232 953 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 ACADLP28330 430 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 SHMT2P34897 504 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 COPS2P61201 443 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 DCDP81605 110 aaKnown RBP14.86□□□□□ -0.03
RAB5C-205ENST00000550013 TBX2Q13207 712 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-205ENST00000550013 CRB2Q5IJ48 1285 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 LYPLAL1Q5VWZ2 237 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 AADACL2Q6P093 401 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 IGFL3Q6UXB1 125 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 NAPRTQ6XQN6 538 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 KLHDC8BQ8IXV7 354 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 OR2Y1Q8NGV0 311 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 PROKR1Q8TCW9 393 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 C17orf62Q9BQA9 187 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 PIH1D1Q9NWS0 290 aaKnown RBP14.86□□□□□ -0.03
RAB5C-205ENST00000550013 FEZ2Q9UHY8 353 aaPredicted RBP14.86□□□□□ -0.03
RAB5C-205ENST00000550013 ASF1AQ9Y294 204 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 TDRKHQ9Y2W6 561 aaKnown RBP14.86□□□□□ -0.03
RAB5C-205ENST00000550013 PCDHA13Q9Y5I0 950 aa14.86□□□□□ -0.03
RAB5C-205ENST00000550013 ABCA12Q86UK0 2595 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 A0A0J9YY10 115 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 CCDC78A2IDD5 438 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 ANKUB1A6NFN9 424 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 H7C0S8 307 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 LIN7AO14910 233 aaPredicted RBP14.85□□□□□ -0.03
RAB5C-205ENST00000550013 AP2A2O94973 939 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 PEBP1P30086 187 aaKnown RBP14.85□□□□□ -0.03
RAB5C-205ENST00000550013 CTNNA1P35221 906 aaKnown RBP14.85□□□□□ -0.03
RAB5C-205ENST00000550013 CACNG1Q06432 222 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 POU6F1Q14863 301 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 NKAIN1Q4KMZ8 207 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms