RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PPP5CP53041 499 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 FCGRTP55899 365 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 TBX4P57082 545 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 IL2P60568 153 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 CAP1Q01518 475 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 SERINC3Q13530 473 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 GBX1Q14549 363 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 CTSL3PQ5NE16 218 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 AGMOQ6ZNB7 445 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 FKBP9P1Q75LS8 142 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 LRRC8DQ7L1W4 858 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 GOLGA7Q7Z5G4 137 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 GPR149Q86SP6 731 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 RHOXF1Q8NHV9 184 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 NETO1Q8TDF5 533 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 LGALS12Q96DT0 336 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 ZBED2Q9BTP6 218 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 PKP3Q9Y446 797 aa13.46□□□□□ -0.26
HDAC7-228ENST00000548938 F8W810 466 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 POMCP01189 267 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 PKMP14618 531 aaKnown RBP13.45□□□□□ -0.26
HDAC7-228ENST00000548938 JUNDP17535 347 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 TCEA1P23193 301 aaKnown RBP13.45□□□□□ -0.26
HDAC7-228ENST00000548938 CLK3P49761 638 aaKnown RBP13.45□□□□□ -0.26
HDAC7-228ENST00000548938 RFX4Q33E94 735 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 ZC3H12BQ5HYM0 836 aaKnown RBP13.45□□□□□ -0.26
HDAC7-228ENST00000548938 GNASQ5JWF2 1037 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 OVOS1Q6IE37 1185 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 CYP2U1Q7Z449 544 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 HIPK1Q86Z02 1210 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 SPATA2LQ8IUW3 424 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-228ENST00000548938 PLD3Q8IV08 490 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 LYSMD2Q8IV50 215 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 KRTCAP2Q8N6L1 136 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 ZBTB18Q99592 522 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 ACOT13Q9NPJ3 140 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 KLHL3Q9UH77 587 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 ZMYM5Q9UJ78 669 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 TPRKBQ9Y3C4 175 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 HTTP42858 3142 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 PTPRDP23468 1912 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 PATJQ8NI35 1801 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 PSMD11O00231 422 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 RETP07949 1114 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 SEPHS1P49903 392 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 CEP68Q76N32 757 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 GLT6D1Q7Z4J2 308 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 AKAP14Q86UN6 197 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 ZNF540Q8NDQ6 660 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 MCFD2Q8NI22 146 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 PYCR2Q96C36 320 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 MYEOVQ96EZ4 313 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 TRIB3Q96RU7 358 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 MYOCQ99972 504 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 TPK1Q9H3S4 243 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 ZFP14Q9HCL3 533 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 OSGIN1Q9UJX0 560 aa13.45□□□□□ -0.26
HDAC7-228ENST00000548938 TMEM88BA6NKF7 163 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 IQCF5A8MTL0 148 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 TBX1O43435 398 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 UPK1BO75841 260 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 TBX18O95935 607 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 EPOP01588 193 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 ITGB1P05556 798 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 LCKP06239 509 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 SERPINF2P08697 491 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 S100A1P23297 94 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 TGFBR2P37173 567 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 NR4A2P43354 598 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 EFEMP1Q12805 493 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CDC20Q12834 499 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CARD16Q5EG05 197 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 COLEC12Q5KU26 742 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CPZQ66K79 652 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CES5AQ6NT32 575 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CD300LGQ6UXG3 332 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 PRSS48Q7RTY5 328 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 NLRC5Q86WI3 1866 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 MDGA1Q8NFP4 955 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CLHC1Q8NHS4 586 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 ZHX1-C8orf76Q96EF9 292 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 KAT8Q9H7Z6 458 aaKnown RBP13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CPNE5Q9HCH3 593 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 RIMKLBQ9ULI2 386 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 ST3GAL5Q9UNP4 418 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CCL27Q9Y4X3 112 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 FFAR3O14843 346 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 GPR42O15529 346 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 GPR39O43194 453 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 KCNK2O95069 426 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 PGRP06401 933 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 HMBSP08397 361 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 CD36P16671 472 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 RPL9P32969 192 aaKnown RBP13.44□□□□□ -0.26
HDAC7-228ENST00000548938 HMGCS1Q01581 520 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 PRKCZQ05513 592 aa13.44□□□□□ -0.26
HDAC7-228ENST00000548938 TRAF3Q13114 568 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 369.4 ms