RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 RGS13O14921 159 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 NIPSNAP2O75323 286 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 PGRP06401 933 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 CNPP09543 421 aaKnown RBP22.65■■□□□ 1.22
NPAS3-206ENST00000548645 TGFBR1P36897 503 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 ADAM17P78536 824 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 GOLGA7Q7Z5G4 137 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 ZDHHC21Q8IVQ6 265 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 PHACTR4Q8IZ21 702 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 CHCHD4Q8N4Q1 142 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 OR4K2Q8NGD2 314 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 IPCEF1Q8WWN9 437 aaPredicted RBP22.65■■□□□ 1.22
NPAS3-206ENST00000548645 PROX1Q92786 737 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 TBC1D20Q96BZ9 403 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 FAM120BQ96EK7 910 aaKnown RBP22.65■■□□□ 1.22
NPAS3-206ENST00000548645 SLC39A13Q96H72 371 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 C1orf109Q9NX04 203 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 PABPN1LA6NDY0 278 aaKnown RBP22.65■■□□□ 1.22
NPAS3-206ENST00000548645 NR4A2P43354 598 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 NKX2-5P52952 324 aaPredicted RBP22.65■■□□□ 1.22
NPAS3-206ENST00000548645 MFSD10Q14728 455 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 PCBP2Q15366 365 aaKnown RBP eCLIP22.65■■□□□ 1.22
NPAS3-206ENST00000548645 SPANXN4Q5MJ08 99 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 SLC38A4Q969I6 547 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 NDEL1Q9GZM8 345 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 VNN3Q9NY84 501 aa22.65■■□□□ 1.22
NPAS3-206ENST00000548645 METTL15A6NJ78 407 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 TNFRSF10BO14763 440 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 MUSKO15146 869 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 OTCP00480 354 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 TBX4P57082 545 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 KRR1Q13601 381 aaKnown RBP22.64■■□□□ 1.22
NPAS3-206ENST00000548645 UPP1Q16831 310 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 CES5AQ6NT32 575 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 CLIP4Q8N3C7 705 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 CD200R1Q8TD46 325 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 RHNO1Q9BSD3 238 aa22.64■■□□□ 1.22
NPAS3-206ENST00000548645 OR7A17O14581 309 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 RAD51BO15315 384 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 CD9P21926 228 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 DAPP51397 102 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 SERINC3Q13530 473 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 GTF2H2Q13888 395 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 MAD2L1BPQ15013 274 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-206ENST00000548645 CLPPQ16740 277 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-206ENST00000548645 GTF2H2CQ6P1K8 395 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 ITPAQ9BY32 194 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 TP63Q9H3D4 680 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-206ENST00000548645 RGS14O43566 566 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 CASP3P42574 277 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 MAGEA2P43356 314 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 TRPC1P48995 793 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 SMN1Q16637 294 aaKnown RBP22.64■■□□□ 1.21
NPAS3-206ENST00000548645 PARP15Q460N3 678 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 KDM4DQ6B0I6 523 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 TSPYL5Q86VY4 417 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-206ENST00000548645 TTC29Q8NA56 475 aaPredicted RBP22.64■■□□□ 1.21
NPAS3-206ENST00000548645 OR10T2Q8NGX3 314 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 ABHD16BQ9H3Z7 469 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 A3GALT2U3KPV4 340 aa22.64■■□□□ 1.21
NPAS3-206ENST00000548645 LCKP06239 509 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 BMPR1AP36894 532 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 GTF2H3Q13889 308 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 PAN2Q504Q3 1202 aaKnown RBP22.63■■□□□ 1.21
NPAS3-206ENST00000548645 SLX4IPQ5VYV7 408 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 CALHM3Q86XJ0 350 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 Q8N9G6 341 aaPredicted RBP22.63■■□□□ 1.21
NPAS3-206ENST00000548645 CHAC2Q8WUX2 184 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 OR52E6Q96RD3 313 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 C6orf62Q9GZU0 229 aaPredicted RBP22.63■■□□□ 1.21
NPAS3-206ENST00000548645 NEK6Q9HC98 313 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 FAM105AQ9NUU6 356 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 CCL27Q9Y4X3 112 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 MN1Q10571 1320 aaPredicted RBP22.63■■□□□ 1.21
NPAS3-206ENST00000548645 DOCK4Q8N1I0 1966 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 KRT75O95678 551 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 PPP3CCP48454 512 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 SMU1Q2TAY7 513 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 GTDC1Q4AE62 458 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 CACHD1Q5VU97 1274 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 UBE2UQ5VVX9 321 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 PNCKQ6P2M8 343 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 GLT6D1Q7Z4J2 308 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 MILR1Q7Z6M3 343 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 SPATA2LQ8IUW3 424 aaPredicted RBP22.63■■□□□ 1.21
NPAS3-206ENST00000548645 DNAJB8Q8NHS0 232 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 LPPQ93052 612 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 BARD1Q99728 777 aaKnown RBP22.63■■□□□ 1.21
NPAS3-206ENST00000548645 NDRG4Q9ULP0 352 aaKnown RBP22.63■■□□□ 1.21
NPAS3-206ENST00000548645 SPO11Q9Y5K1 396 aa22.63■■□□□ 1.21
NPAS3-206ENST00000548645 IGLV3-10A0A075B6K4 115 aa22.62■■□□□ 1.21
NPAS3-206ENST00000548645 ARVCFO00192 962 aa22.62■■□□□ 1.21
NPAS3-206ENST00000548645 AIREO43918 545 aa22.62■■□□□ 1.21
NPAS3-206ENST00000548645 EFNA1P20827 205 aaPredicted RBP22.62■■□□□ 1.21
NPAS3-206ENST00000548645 TTPAP49638 278 aa22.62■■□□□ 1.21
NPAS3-206ENST00000548645 CDKN1CP49918 316 aaPredicted RBP22.62■■□□□ 1.21
NPAS3-206ENST00000548645 TSPY1Q01534 308 aa22.62■■□□□ 1.21
NPAS3-206ENST00000548645 ZNF45Q02386 682 aa22.62■■□□□ 1.21
NPAS3-206ENST00000548645 CARD16Q5EG05 197 aa22.62■■□□□ 1.21
NPAS3-206ENST00000548645 DESI1Q6ICB0 168 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms