RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TRIM42Q8IWZ5 723 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 TBC1D21Q8IYX1 336 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 OR5AR1Q8NGP9 310 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 CAPN10Q9HC96 672 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 NCKIPSDQ9NZQ3 722 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 PCDHGA5Q9Y5G8 931 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 MYO15AQ9UKN7 3530 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 RXRGP48443 463 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 SULT1C3Q6IMI6 304 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 DUS1LQ6P1R4 473 aaKnown RBP28.02■■■□□ 2.08
BRF1-213ENST00000548421 MBOAT1Q6ZNC8 495 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 RAB44Q7Z6P3 723 aaPredicted RBP28.02■■■□□ 2.08
BRF1-213ENST00000548421 PHC3Q8NDX5 983 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 MAGEB18Q96M61 343 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 CCDC138Q96M89 665 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 FERD3LQ96RJ6 166 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 SLC6A14Q9UN76 642 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 DOLKQ9UPQ8 538 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 ADAMTS9Q9P2N4 1935 aa28.01■■■□□ 2.08
BRF1-213ENST00000548421 CACNA1HO95180 2353 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 PCDH15Q96QU1 1955 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 STX16-NPEPL1H3BU86 382 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 MYO1CO00159 1063 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 STX16O14662 325 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 FGF3P11487 239 aaPredicted RBP28.01■■■□□ 2.07
BRF1-213ENST00000548421 SLC2A4P14672 509 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 BGNP21810 368 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 CHI3L2Q15782 390 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 ZNF423Q2M1K9 1284 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 CCSMST1Q4G0I0 132 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 TRIM61Q5EBN2 209 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 TTC19Q6DKK2 380 aaPredicted RBP28.01■■■□□ 2.07
BRF1-213ENST00000548421 TCAIMQ8N3R3 496 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 PPP1R14CQ8TAE6 165 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 RAB3IL1Q8TBN0 382 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 RAD51AP1Q96B01 352 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 RHBDF1Q96CC6 855 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 MVB12BQ9H7P6 319 aa28.01■■■□□ 2.07
BRF1-213ENST00000548421 OR5K4A6NMS3 321 aa28■■■□□ 2.07
BRF1-213ENST00000548421 SDC3O75056 442 aa28■■■□□ 2.07
BRF1-213ENST00000548421 H2AFYO75367 372 aaKnown RBP28■■■□□ 2.07
BRF1-213ENST00000548421 MPLP40238 635 aa28■■■□□ 2.07
BRF1-213ENST00000548421 HNMTP50135 292 aa28■■■□□ 2.07
BRF1-213ENST00000548421 SETDB1Q15047 1291 aa28■■■□□ 2.07
BRF1-213ENST00000548421 IYDQ6PHW0 289 aa28■■■□□ 2.07
BRF1-213ENST00000548421 IL27RAQ6UWB1 636 aa28■■■□□ 2.07
BRF1-213ENST00000548421 FAM46DQ8NEK8 389 aa28■■■□□ 2.07
BRF1-213ENST00000548421 LRRC8CQ8TDW0 803 aa28■■■□□ 2.07
BRF1-213ENST00000548421 TMEM237Q96Q45 408 aa28■■■□□ 2.07
BRF1-213ENST00000548421 PKP4Q99569 1192 aa28■■■□□ 2.07
BRF1-213ENST00000548421 CAPS2Q9BXY5 557 aa28■■■□□ 2.07
BRF1-213ENST00000548421 MANSC1Q9H8J5 431 aa28■■■□□ 2.07
BRF1-213ENST00000548421 PTBP2Q9UKA9 531 aaKnown RBP28■■■□□ 2.07
BRF1-213ENST00000548421 COLEC10Q9Y6Z7 277 aa28■■■□□ 2.07
BRF1-213ENST00000548421 PATE3B3GLJ2 98 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 LMO7DNF2Z398 122 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 IMPDH1P20839 514 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 HERVK_113P63132 956 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 KRT33BQ14525 404 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 ZCCHC23Q6ZST2 131 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 OR9A1PQ8NGU1 263 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 FBXL8Q96CD0 374 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 L3HYPDHQ96EM0 354 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 ERVK-6Q9BXR3 956 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 ARRDC1-AS1Q9H2J1 176 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 CCDC134Q9H6E4 229 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 FSCN3Q9NQT6 498 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 WWOXQ9NZC7 414 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 POLG2Q9UHN1 485 aa27.99■■■□□ 2.07
BRF1-213ENST00000548421 TDRKHQ9Y2W6 561 aaKnown RBP27.99■■■□□ 2.07
BRF1-213ENST00000548421 KIR2DS5A0A0G2JLQ3 304 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 A0A0G2JNG1 304 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 KRT87PA6NCN2 255 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 KIR2DS3K7RE56 304 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 YY2O15391 372 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 DFNA5O60443 496 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 NDUFS1P28331 727 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 NAGLUP54802 743 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 KIR2DS5Q14953 304 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 HLA-BQ31612 363 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 LAIR1Q6GTX8 287 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 ZDHHC1Q8WTX9 485 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 ATL1Q8WXF7 558 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 ZNF75CPQ92670 426 aaPredicted RBP27.98■■■□□ 2.07
BRF1-213ENST00000548421 CXorf40BQ96DE9 158 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 HGH1Q9BTY7 390 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 ZNF624Q9P2J8 865 aaPredicted RBP27.98■■■□□ 2.07
BRF1-213ENST00000548421 ADAM21Q9UKJ8 722 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 TNPO3Q9Y5L0 923 aaKnown RBP27.98■■■□□ 2.07
BRF1-213ENST00000548421 CSNK1G3Q9Y6M4 447 aa27.98■■■□□ 2.07
BRF1-213ENST00000548421 SERPINE1P05121 402 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 TCF15Q12870 199 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 PRKG2Q13237 762 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 SHBQ15464 509 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 ZNF678Q5SXM1 525 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 ATG16L1Q676U5 607 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 NAGSQ8N159 534 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 PRSS33Q8NF86 280 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 OR6Y1Q8NGX8 325 aa27.97■■■□□ 2.07
BRF1-213ENST00000548421 UBTD2Q8WUN7 234 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms