RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TIMP2P16035 220 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 MAPKAPK3Q16644 382 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 IER5LQ5T953 404 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM214Q6NUQ4 689 aaKnown RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 CPXM2Q8N436 756 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 NMD3Q96D46 503 aaKnown RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 OR52E6Q96RD3 313 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 LRTM1Q9HBL6 345 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 HSFX1Q9UBD0 423 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 EIF3LQ9Y262 564 aaKnown RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 KIAA0355O15063 1070 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 GMNNO75496 209 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 PCDH8O95206 1070 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 ADH5P11766 374 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 IL10P22301 178 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 PSMA4P25789 261 aaKnown RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 CDH15P55291 814 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 RHDQ02161 417 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 PPIGQ13427 754 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■□□□ 14.5
SCAF11-209ENST00000547018 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 MAGEE2Q8TD90 523 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 MCOLN3Q8TDD5 553 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 SLCO4A1Q96BD0 722 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 C7orf72A4D263 438 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 EPHX1P07099 455 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 MYCLP1P12525 358 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 SEC13P55735 322 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 GPM6BQ13491 265 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 CDKN3Q16667 212 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 ZXDCQ2QGD7 858 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 NEK5Q6P3R8 708 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 SATL1Q86VE3 508 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 OR2T34Q8NGX1 318 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 OR2T3Q8NH03 318 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 CEP295NLQ96MC4 621 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 HPS4Q9NQG7 708 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 VAPAQ9P0L0 249 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 C6orf203Q9P0P8 240 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM181Q9P2C4 612 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 IL36AQ9UHA7 158 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 PNMA8BQ9ULN7 279 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-209ENST00000547018 DGKBQ9Y6T7 804 aa12.43□□□□□ -0.42
SCAF11-209ENST00000547018 PLOD2O00469 737 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 EFCAB14O75071 495 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 CLDN9O95484 217 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 CYP17A1P05093 508 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 HNF4AP41235 474 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 GNPDA1P46926 289 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 PLCL1Q15111 1095 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 GPR33Q49SQ1 333 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM259Q4ZIN3 620 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 PARS2Q7L3T8 475 aaKnown RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 IL17FQ96PD4 163 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 DEC1Q9P2X7 70 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 LIMD1Q9UGP4 676 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 LEF1Q9UJU2 399 aaPredicted RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 PTBP2Q9UKA9 531 aaKnown RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 OAZ3Q9UMX2 235 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 MYO10Q9HD67 2058 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 IFRD1O00458 451 aaPredicted RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 SOCS2O14508 198 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 LSM1O15116 133 aaKnown RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 RGS14O43566 566 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 AQP1P29972 269 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 SOX9P48436 509 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 PSMD8P48556 350 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 GLYATQ6IB77 296 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 ST13P4Q8IZP2 240 aaPredicted RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 GATA6Q92908 595 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 MANBAO00462 879 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 GNGT2O14610 69 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 LATS1O95835 1130 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 GNAO1P09471 354 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 LINC00271P0C7V0 271 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 VARSP26640 1264 aaKnown RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 GPR1P46091 355 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 SULT1C3Q6IMI6 304 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 CHST15Q7LFX5 561 aaPredicted RBP12.42□□□□□ -0.42
SCAF11-209ENST00000547018 APIPQ96GX9 242 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 OSGEPL1Q9H4B0 414 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 IKZF5Q9H5V7 419 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 DYRK4Q9NR20 520 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 OARD1Q9Y530 152 aa12.42□□□□□ -0.42
SCAF11-209ENST00000547018 SLC22A2O15244 555 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 SLC16A8O95907 504 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 KRT6AP02538 564 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 KRT6BP04259 564 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 MAT2AP31153 395 aaKnown RBP12.41□□□□□ -0.42
SCAF11-209ENST00000547018 KRT6CP48668 564 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ACADVLP49748 655 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 MAPK10P53779 464 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ADARP55265 1226 aaKnown RBP12.41□□□□□ -0.42
SCAF11-209ENST00000547018 CREMQ03060 361 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM115Q12893 351 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-209ENST00000547018 INPP5AQ14642 412 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 GSTA3Q16772 222 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 MPP7Q5T2T1 576 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 CACHD1Q5VU97 1274 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ZFP1Q6P2D0 407 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms