RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 RAB11FIP2Q7L804 512 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 MARCH9Q86YJ5 346 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 ADGRF3Q8IZF5 1079 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 GPATCH11Q8N954 259 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 AGBL5Q8NDL9 886 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 HMGCLL1Q8TB92 370 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 ANKRD7Q92527 254 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 UBXN4Q92575 508 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 FAM136AQ96C01 138 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 NXPE2Q96DL1 559 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 PRR11Q96HE9 360 aaPredicted RBP14.05□□□□□ -0.16
DDX54-203ENST00000546869 VPS39Q96JC1 886 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 CCDC74BQ96LY2 380 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 RBBP8Q99708 897 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 RAB11FIP5Q9BXF6 653 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 ACSS3Q9H6R3 686 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 TMEM9Q9P0T7 183 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 ICKQ9UPZ9 632 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 FAM95CA0A1B0GW59 222 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 A0A1W2PNU3 283 aaPredicted RBP14.04□□□□□ -0.16
DDX54-203ENST00000546869 BTN3A3O00478 584 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 PLD2O14939 933 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 SLC16A5O15375 505 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 RAB28P51157 221 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 IL2P60568 153 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 PRKAA1Q13131 559 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 PDAP1Q13442 181 aaKnown RBP14.04□□□□□ -0.16
DDX54-203ENST00000546869 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 PHF19Q5T6S3 580 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 ARMC6Q6NXE6 501 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 PAQR3Q6TCH7 311 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 KMT5CQ86Y97 462 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 CTAGE3PQ8IX95 158 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 CFAP61Q8NHU2 1237 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 EEF1AKMT1Q8WVE0 214 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 SKA2Q8WVK7 121 aaPredicted RBP14.04□□□□□ -0.16
DDX54-203ENST00000546869 KLHL6Q8WZ60 621 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 SLC46A1Q96NT5 459 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 GPR22Q99680 433 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 OLFM1Q99784 485 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 HGH1Q9BTY7 390 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 TXLNGYQ9BZA5 131 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 ZNF768Q9H5H4 540 aaKnown RBP14.04□□□□□ -0.16
DDX54-203ENST00000546869 SYTL2Q9HCH5 934 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 NFS1Q9Y697 457 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 UNC13CQ8NB66 2214 aa14.04□□□□□ -0.16
DDX54-203ENST00000546869 TMEM8BA6NDV4 472 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 TLCD2A6NGC4 264 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 C2orf74A8MZ97 194 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 B4E171 279 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 MYO1CO00159 1063 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 RASGRF2O14827 1237 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 ZBTB14O43829 449 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 TSPAN12O95859 305 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 CATP04040 527 aaKnown RBP14.03□□□□□ -0.16
DDX54-203ENST00000546869 ABHD2P08910 425 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 MCM3P25205 808 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 PKLRP30613 574 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 CSTF2P33240 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
DDX54-203ENST00000546869 HSD17B2P37059 387 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 TSPAN7P41732 249 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 ABCG1P45844 678 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 PPM1FP49593 454 aaPredicted RBP14.03□□□□□ -0.16
DDX54-203ENST00000546869 GFERP55789 205 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 SP140Q13342 867 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 KIR2DS3Q14952 304 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 ARHGAP19Q14CB8 494 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 C16orf72Q14CZ0 275 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 CPNE9Q8IYJ1 553 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 CNPY4Q8N129 248 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 FBXO39Q8N4B4 442 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 RAB42Q8N4Z0 105 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 NKAPQ8N5F7 415 aaKnown RBP14.03□□□□□ -0.16
DDX54-203ENST00000546869 OR2L8Q8NGY9 312 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 JPH3Q8WXH2 748 aaPredicted RBP14.03□□□□□ -0.16
DDX54-203ENST00000546869 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 TSPAN17Q96FV3 270 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 ELMO2Q96JJ3 720 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 SLC41A2Q96JW4 573 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 TGM7Q96PF1 710 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 ANKZF1Q9H8Y5 726 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 C1GALT1Q9NS00 363 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 SPATA7Q9P0W8 599 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 POMT2Q9UKY4 750 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 SATB2Q9UPW6 733 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 TDRKHQ9Y2W6 561 aaKnown RBP14.03□□□□□ -0.16
DDX54-203ENST00000546869 MTO1Q9Y2Z2 717 aaKnown RBP14.03□□□□□ -0.16
DDX54-203ENST00000546869 LOXL2Q9Y4K0 774 aa14.03□□□□□ -0.16
DDX54-203ENST00000546869 PIPSLA2A3N6 862 aa14.02□□□□□ -0.17
DDX54-203ENST00000546869 BTN3A1O00481 513 aa14.02□□□□□ -0.17
DDX54-203ENST00000546869 PIAS1O75925 651 aa14.02□□□□□ -0.17
DDX54-203ENST00000546869 FKBP9O95302 570 aa14.02□□□□□ -0.17
DDX54-203ENST00000546869 WISP3O95389 354 aaPredicted RBP14.02□□□□□ -0.17
DDX54-203ENST00000546869 C8GP07360 202 aa14.02□□□□□ -0.17
DDX54-203ENST00000546869 ITGA2BP08514 1039 aa14.02□□□□□ -0.17
DDX54-203ENST00000546869 CHRM5P08912 532 aaPredicted RBP14.02□□□□□ -0.17
DDX54-203ENST00000546869 ERGP11308 486 aa14.02□□□□□ -0.17
DDX54-203ENST00000546869 NELFEP18615 380 aaKnown RBP14.02□□□□□ -0.17
DDX54-203ENST00000546869 POLR2CP19387 275 aaPredicted RBP14.02□□□□□ -0.17
DDX54-203ENST00000546869 MPSTP25325 297 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms