RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 DUS1LQ6P1R4 473 aaKnown RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 RPTNQ6XPR3 784 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 SPATA6LQ8N4H0 392 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 C2orf69Q8N8R5 385 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 MFSD2AQ8NA29 543 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 FBXL18Q96ME1 805 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 POLR2J3Q9H1A7 115 aaKnown RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 AKTIPQ9H8T0 292 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 PCDHGB5Q9Y5G0 923 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 SPIN1Q9Y657 262 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 ANKRD33BA6NCL7 494 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 A8MT66 165 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 NDUFB5O43674 189 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 RNASEH2AO75792 299 aaKnown RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 CNTN5O94779 1100 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 KDM4BO94953 1096 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 MC4RP32245 332 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 TAS2R43P59537 309 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 SNRPD1P62314 119 aaKnown RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 ANKRD26P1Q6NSI1 321 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF730Q6ZMV8 503 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 DPY19L3Q6ZPD9 716 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 QSOX2Q6ZRP7 698 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 GDPD1Q8N9F7 314 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 POMGNT2Q8NAT1 580 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 HJURPQ8NCD3 748 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 OR13J1Q8NGT2 312 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 POPDC3Q9HBV1 291 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 PAQR5Q9NXK6 330 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 MGAT4AQ9UM21 535 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 TIMM22Q9Y584 194 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 MYH10P35580 1976 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 TEX51A0A1B0GUA7 166 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 URADA6NGE7 173 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 TEX28O15482 410 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 TGM6O95932 706 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 CTBP2P56545 445 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF267Q14586 743 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 GPAT3Q53EU6 434 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 PPP1R26Q5T8A7 1209 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-212ENST00000546744 KLHL24Q6TFL4 600 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 TRIM48Q8IWZ4 208 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 LILRB4Q8NHJ6 448 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 MAGIXQ9H6Y5 334 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 QPCTLQ9NXS2 382 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 MYH7P12883 1935 aa12.57□□□□□ -0.4
PTCH1-212ENST00000546744 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 DCLK1O15075 740 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 DLX3O60479 287 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 SNNO75324 88 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 RP2O75695 350 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 PIGRP01833 764 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 TNNI3P19429 210 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 HOXD10P28358 340 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 YAP1P46937 504 aaKnown RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MXD1Q05195 221 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 CACNG1Q06432 222 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 DSC3Q14574 896 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 ZBTB6Q15916 424 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 ZC3HC1Q86WB0 502 aaKnown RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 TCEAL4Q96EI5 215 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 SCGB3A2Q96PL1 93 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MCCC1Q96RQ3 725 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 PCDHB3Q9Y5E6 796 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 NT5C1B-RDH14C9J2C7 533 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 M0R2N6 131 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 RLN2P04090 185 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 NDST2P52849 883 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 HEPACAMQ14CZ8 416 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 TRAM1Q15629 374 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 RABL3Q5HYI8 236 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 OXR1Q8N573 874 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 NCSTNQ92542 709 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF597Q96LX8 424 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MUS81Q96NY9 551 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 NEDD4LQ96PU5 975 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MRPL45Q9BRJ2 306 aaKnown RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 UCKL1Q9NWZ5 548 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 ASB4Q9Y574 426 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MAU2Q9Y6X3 613 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 GRXCR2A6NFK2 248 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 OR2AT4A6NND4 320 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 SPATA31C2B4DYI2 1134 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 HCN1O60741 890 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MANFP55145 182 aaKnown RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 PTGR1Q14914 329 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 CAPN13Q6MZZ7 669 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MON1AQ86VX9 555 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 METTL25Q8N6Q8 603 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 BRSK1Q8TDC3 778 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 FBXL20Q96IG2 436 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 SNX27Q96L92 541 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 SIGLEC10Q96LC7 697 aa12.56□□□□□ -0.4
PTCH1-212ENST00000546744 MKRN2Q9H000 416 aaKnown RBP12.56□□□□□ -0.4
PTCH1-212ENST00000546744 BTBD1Q9H0C5 482 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms