RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SPATA17Q96L03 361 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 DACH2Q96NX9 599 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 MUS81Q96NY9 551 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PGLYRP2Q96PD5 576 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 NODALQ96S42 347 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SEMA3CQ99985 751 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SLC39A3Q9BRY0 314 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 MTG1Q9BT17 334 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 DCUN1D5Q9BTE7 237 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 RMND5AQ9H871 391 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SP140LQ9H930 580 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 NTN4Q9HB63 628 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 FANCEQ9HB96 536 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PDFQ9HBH1 243 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 TLR8Q9NR97 1041 aaKnown RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PAK1IP1Q9NWT1 392 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SCN3BQ9NY72 215 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 TRPS1Q9UHF7 1281 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 BAG5Q9UL15 447 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 MAN2B2Q9Y2E5 1009 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 UGT2A1Q9Y4X1 527 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 TRIP11Q15643 1979 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 DICER1Q9UPY3 1922 aaKnown RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 MN1Q10571 1320 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 hCG_2014768A0A024R1R8 64 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CXorf51AA0A1B0GTR3 108 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 LOC100130705A0A1B0GUX0 176 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 A0A1W2PQH9 124 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF99A8MXY4 864 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 TAF4O00268 1085 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 BTN3A1O00481 513 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 E2F3O00716 465 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 WNT9AO14904 365 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ANKRD28O15084 1053 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 LSM1O15116 133 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 TPST1O60507 370 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CNOT3O75175 753 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 NDUFS2O75306 463 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ATP6V1G1O75348 118 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PRKD3O94806 890 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SEC24DO94855 1032 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 EOMESO95936 686 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 GHRHP01286 108 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SLC4A1P02730 911 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF865P0CJ78 1059 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CBSLP0DN79 551 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PRPS2P11908 318 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PTX3P26022 381 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ACVR2AP27037 513 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CBSP35520 551 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 UGT2B10P36537 528 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 MTHFRP42898 656 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 MAGEA2P43356 314 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PLA2G16P53816 162 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 DIO3P55073 304 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CDH4P55283 916 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 UFM1P61960 85 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PURAQ00577 322 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SLC10A7Q0GE19 358 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ABHD18Q0P651 414 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 LRRC74AQ0VAA2 488 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CDC20Q12834 499 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 TSNQ15631 228 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 NEDD8Q15843 81 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 RBBP7Q16576 425 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 TIGD2Q4W5G0 525 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CCDC92Q53HC0 331 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 RABL3Q5HYI8 236 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PAGE3Q5JUK9 113 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 LRIF1Q5T3J3 769 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SYT6Q5T7P8 510 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 AGAP7PQ5VUJ5 663 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF691Q5VV52 312 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF280DQ6N043 979 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SHQ1Q6PI26 577 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PAQR3Q6TCH7 311 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CRTC3Q6UUV7 619 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CCDC81Q6ZN84 652 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 NCCRP1Q6ZVX7 275 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CHST9Q7L1S5 443 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 LRRC8DQ7L1W4 858 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 R3HCC1LQ7Z5L2 792 aaKnown RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 STK32CQ86UX6 486 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 PIM3Q86V86 326 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CALHM3Q86XJ0 350 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 MICU2Q8IYU8 434 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 TCAIMQ8N3R3 496 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 Q8N3U1 123 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 DTWD1Q8N5C7 304 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ARL10Q8N8L6 244 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CHDHQ8NE62 594 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF548Q8NEK5 533 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-225ENST00000545920 ABHD11Q8NFV4 315 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 GRIN3AQ8TCU5 1115 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 BLOC1S5Q8TDH9 187 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 STK35Q8TDR2 534 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 CHAC2Q8WUX2 184 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SLC13A3Q8WWT9 602 aa6.34□□□□□ -1.39
SNHG1-225ENST00000545920 SOCS4Q8WXH5 440 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms