RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ADGRG4Q8IZF6 3080 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SHANK1Q9Y566 2161 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 OR14I1A6ND48 311 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 NUDT19A8MXV4 375 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 ACOT7O00154 380 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SNX2O60749 519 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PMPCBO75439 489 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PRKD3O94806 890 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 HEXIM1O94992 359 aaKnown RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 EML2O95834 649 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CALCAP01258 141 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 S100BP04271 92 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 ERBB2P04626 1255 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 HBQ1P09105 142 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 FOLR1P15328 257 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 TYRP1P17643 537 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 XRCC1P18887 633 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SLC9A1P19634 815 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 AGXTP21549 392 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SDHAP31040 664 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 VIPR1P32241 457 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 OTX2P32243 289 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 RENBPP51606 427 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CLCNKAP51800 687 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 KCNK10P57789 538 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SESN3P58005 492 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 AP1S1P61966 158 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 UBE2IP63279 158 aaKnown RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 HSD11B2P80365 405 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PRR5P85299 388 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 FKBP3Q00688 224 aaKnown RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 ADCY2Q08462 1091 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 NSUN2Q08J23 767 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 GPS2Q13227 327 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 NCF4Q15080 339 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PCOLCEQ15113 449 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PRKD1Q15139 912 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CYTH1Q15438 398 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 TERF2Q15554 542 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CNGA3Q16281 694 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 LONRF1Q17RB8 773 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 FAM102AQ5T9C2 384 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 MANEALQ5VSG8 457 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 AGAP7PQ5VUJ5 663 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 RESP18Q5W5W9 173 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 FAAH2Q6GMR7 532 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 IGFL2Q6UWQ7 119 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 KRBA2Q6ZNG9 492 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 FAM92BQ6ZTR7 304 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 MARK2Q7KZI7 788 aaKnown RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 RRAGAQ7L523 313 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CHST15Q7LFX5 561 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 MRGPREQ86SM8 312 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SRLQ86TD4 932 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 FAM131BQ86XD5 332 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 ZSWIM9Q86XI8 627 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PASD1Q8IV76 773 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 RAVER1Q8IY67 606 aaKnown RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 GRAMD1CQ8IYS0 662 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 EID3Q8N140 333 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 NDUFAF2Q8N183 169 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CARFQ8N187 725 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PELI3Q8N2H9 469 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CNTD1Q8N815 330 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 MSANTD4Q8NCY6 345 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 EXD1Q8NHP7 514 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 NR4A3Q92570 626 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 KAT5Q92993 513 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 NACC2Q96BF6 587 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 AP2M1Q96CW1 435 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CLIP3Q96DZ5 547 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CCDC34Q96HJ3 373 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 VPS50Q96JG6 964 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CNDP1Q96KN2 507 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 AGAP4Q96P64 663 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 GBP5Q96PP8 586 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 TBCBQ99426 244 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CD180Q99467 661 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 MENTQ9BUN1 341 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 MLPHQ9BV36 600 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CINPQ9BW66 212 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 GTPBP4Q9BZE4 634 aaKnown RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SLC7A5P2Q9GIP4 190 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 ENKD1Q9H0I2 346 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 CATSPERBQ9H7T0 1116 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 AKIRIN1Q9H9L7 192 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 SYTL2Q9HCH5 934 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PLCB1Q9NQ66 1216 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 DLL4Q9NR61 685 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 OGFRQ9NZT2 677 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 KLHL42Q9P2K6 505 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 AJAP1Q9UKB5 411 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-220ENST00000544550 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 ESPL1Q14674 2120 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PDZD2O15018 2839 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 PCNX1Q96RV3 2341 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 ITPR3Q14573 2671 aa3.98□□□□□ -1.77
SNHG1-220ENST00000544550 IGHV5-51A0A0C4DH38 117 aa3.97□□□□□ -1.77
SNHG1-220ENST00000544550 UBA6A0AVT1 1052 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms