RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 TRIM73Q86UV7 250 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 PLCZ1Q86YW0 608 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 OR2L2Q8NH16 312 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 RBM18Q96H35 190 aaKnown RBP15.19■□□□□ 0.02
CHD4-210ENST00000544040 LHX5Q9H2C1 402 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 SLC17A6Q9P2U8 582 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 PRELID1Q9Y255 219 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 CEMIPQ8WUJ3 1361 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 NPTX1Q15818 432 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 ATXN7L2Q5T6C5 722 aaPredicted RBP15.19■□□□□ 0.02
CHD4-210ENST00000544040 BPIFB1Q8TDL5 484 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 SMG7Q92540 1137 aaKnown RBP15.19■□□□□ 0.02
CHD4-210ENST00000544040 ZNF700Q9H0M5 742 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 DPEP3Q9H4B8 488 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 FAM105AQ9NUU6 356 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 CLDN4O14493 209 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 VNN2O95498 520 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 EDNRAP25101 427 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 NDUFV1P49821 464 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 CLCN4P51793 760 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 ARFRP1Q13795 201 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 CEP68Q76N32 757 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 PCDHAC2Q9Y5I4 1007 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 TLL2Q9Y6L7 1015 aa15.19■□□□□ 0.02
CHD4-210ENST00000544040 C13orf42A0A1B0GVH6 325 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 OAZ2O95190 189 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 BPNT1O95861 308 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 EPHX1P07099 455 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 TACR2P21452 398 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 XKP51811 444 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 SULT2A1Q06520 285 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 GXYLT1Q4G148 440 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 FSTL5Q8N475 847 aaPredicted RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 KLHL36Q8N4N3 616 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ATAD1Q8NBU5 361 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 IL4I1Q96RQ9 567 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.18■□□□□ 0.022e-13■■■■□ 22.5
CHD4-210ENST00000544040 ZNF510Q9Y2H8 683 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ARL5AQ9Y689 179 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 ZNF878C9JN71 531 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ALPPP05187 535 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ASGR1P07306 291 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 CLCN7P51798 805 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 OR12D2P58182 307 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 SCARB2Q14108 478 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 CYP2U1Q7Z449 544 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 SLC22A16Q86VW1 577 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 TOMM5Q8N4H5 51 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 RASSF5Q8WWW0 418 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 MTERF1Q99551 399 aaKnown RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 GATA5Q9BWX5 397 aaPredicted RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 FKBPLQ9UIM3 349 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 MSRAQ9UJ68 235 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ELOA3DA6NLF2 546 aaPredicted RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 NOTOA8MTQ0 251 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 IFNA7P01567 189 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 NCBP2P52298 156 aaKnown RBP eCLIP15.18■□□□□ 0.024e-7■■□□□ 13.1
CHD4-210ENST00000544040 MERTKQ12866 999 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ELOA3BQ3SY89 546 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ARSHQ5FYA8 562 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 RAB11FIP2Q7L804 512 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 DEFB132Q7Z7B7 95 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 ELOA3Q8NG57 546 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 C1orf216Q8TAB5 229 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 GPR151Q8TDV0 419 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 C8orf48Q96LL4 319 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 CYP2S1Q96SQ9 504 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 OSBPL7Q9BZF2 842 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 A8MV72 311 aaPredicted RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 AKAP8O43823 692 aaKnown RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 ODF4Q2M2E3 257 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 SPIN3Q5JUX0 258 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 CDKL4Q5MAI5 379 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 OR7D4Q8NG98 312 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 SLC13A3Q8WWT9 602 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 DNAJB9Q9UBS3 223 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 CARD8Q9Y2G2 431 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 CREB1P16220 341 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 NPR2P20594 1047 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 KHKP50053 298 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 CBLBQ13191 982 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 MAPK14Q16539 360 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 UBXN11Q5T124 520 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 LRRC70Q7Z2Q7 622 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 MARCH9Q86YJ5 346 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 SNX29P2Q8IUI4 249 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 MSL3Q8N5Y2 521 aaKnown RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 LPIN3Q9BQK8 851 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 TRMT61BQ9BVS5 477 aaKnown RBP15.18■□□□□ 0.02
CHD4-210ENST00000544040 FAM198AQ9UFP1 575 aa15.18■□□□□ 0.02
CHD4-210ENST00000544040 DNAJA2O60884 412 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 LRCH4O75427 683 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 PRAMEF12O95522 483 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 HK1P19367 917 aa15.17■□□□□ 0.02
CHD4-210ENST00000544040 RGS19P49795 217 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms