RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SLCO6A1Q86UG4 719 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TDRPQ86YL5 185 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CNPY4Q8N129 248 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR4E2Q8NGC2 313 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ASB11Q8WXH4 323 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RAD51AP1Q96B01 352 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PDLIM5Q96HC4 596 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 UNKQ9C0B0 810 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 LRRN3Q9H3W5 708 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SRMSQ9H3Y6 488 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TOR4AQ9NXH8 423 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PLAGL1Q9UM63 463 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ASXL3Q9C0F0 2248 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 IGHV1OR21-1A0A087WYE8 117 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NPEPPSL1A6NEC2 478 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ARHGEF33A8MVX0 844 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 BTN3A1O00481 513 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 B4GAT1O43505 415 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DUX1O43812 170 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TCEA3O75764 348 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 WISP3O95389 354 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TYRP1P17643 537 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KRT15P19012 456 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GMPRP36959 345 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SP140Q13342 867 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SPIDRQ14159 915 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CCSMST1Q4G0I0 132 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PPM1JQ5JR12 505 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RAB42Q8N4Z0 105 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MCOLN3Q8TDD5 553 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GFM1Q96RP9 751 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ROPN1BQ9BZX4 212 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DERL2Q9GZP9 239 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ROPN1Q9HAT0 212 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ADAMTS6Q9UKP5 1117 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ANKRD12Q6UB98 2062 aa14.07□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GFYI3L273 518 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CASC3O15234 703 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SLC16A5O15375 505 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OPA1O60313 960 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MPOP05164 745 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PROS1P07225 676 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 LTA4HP09960 611 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 HIST1H2AGP0C0S8 130 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CDK4P11802 303 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 HIST1H2ADP20671 130 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SHMT2P34897 504 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ID4P47928 161 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ATP6V0D1P61421 351 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 IRF9Q00978 393 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KLHL35Q6PF15 583 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DHRS13Q6UX07 377 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 USP53Q70EK8 1073 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 FRA10AC1Q70Z53 315 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 AMIGO1Q86WK6 493 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RIBC1Q8N443 379 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR9A1PQ8NGU1 263 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 WDR48Q8TAF3 677 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NCSTNQ92542 709 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ISL2Q96A47 359 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 HIST1H2AHQ96KK5 128 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 UBXN10Q96LJ8 280 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TSNARE1Q96NA8 513 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 HIST1H2AJQ99878 128 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 H2AFJQ9BTM1 129 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TRIM54Q9BYV2 358 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 EPB41L1Q9H4G0 881 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TFB2MQ9H5Q4 396 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 XKR8Q9H6D3 395 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RDH14Q9HBH5 336 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PARVBQ9HBI1 364 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 LNPEPQ9UIQ6 1025 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ICKQ9UPZ9 632 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DMXL1Q9Y485 3027 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 UNC13CQ8NB66 2214 aa14.06□□□□□ -0.16
TNFRSF1A-216ENST00000543995 A0A1W2PQM1 296 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KRT87PA6NCN2 255 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR6C74A6NCV1 312 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CDC7O00311 574 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MT-ND3P03897 115 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CD1DP15813 335 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CD1CP29017 333 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SLC26A3P40879 764 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MAGEA12P43365 314 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PRKAA1Q13131 559 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RASA2Q15283 850 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ARMC6Q6NXE6 501 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TIFABQ6ZNK6 161 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OOSP2Q86WS3 158 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KCTD4Q8WVF5 259 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ANKRD7Q92527 254 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DLG3Q92796 817 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NXNL1Q96CM4 212 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CABS1Q96KC9 395 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ZIM3Q96PE6 472 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NRTNQ99748 197 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RAB11FIP5Q9BXF6 653 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SLC12A9Q9BXP2 914 aa14.05□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NMRAL1Q9HBL8 299 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms