RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 POU4F1Q01851 419 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CREB5Q02930 508 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CDK10Q15131 360 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 NPY5RQ15761 445 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 DHRS4L2Q6PKH6 230 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ACAD11Q709F0 780 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 SELENOMQ8WWX9 145 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 APIPQ96GX9 242 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ELMO2Q96JJ3 720 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 PACRGQ96M98 296 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 ABHD1Q96SE0 405 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 NLNQ9BYT8 704 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 MRPL37Q9BZE1 423 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 WWP1Q9H0M0 922 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 DDX47Q9H0S4 455 aaKnown RBP8.74□□□□□ -1.01
VPS13D-212ENST00000543766 TBC1D13Q9NVG8 400 aa8.74□□□□□ -1.01
VPS13D-212ENST00000543766 CNTNAP2Q9UHC6 1331 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 A0A075B6Q4 140 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 A0A0A6YYJ9 748 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 MYOCOSA0A1B0GUC4 107 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 FAM205CA6NFA0 338 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 DUXAA6NLW8 204 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 SLCO1B7G3V0H7 640 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 MATN3O15232 486 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ITM2AO43736 263 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TNFSF4P23510 183 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ADRA1BP35368 520 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TM4SF4P48230 202 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 MC1RQ01726 317 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 LRRC63Q05C16 580 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 SMAD2Q15796 467 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 PRAMEF14Q5SWL7 426 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 RFX6Q8HWS3 928 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 MCOLN2Q8IZK6 566 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 POU5F2Q8N7G0 328 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 MAGEE2Q8TD90 523 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 JADE3Q92613 823 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 CNOT6LQ96LI5 555 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 SOX7Q9BT81 388 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ELOVL1Q9BW60 279 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 C1QTNF1Q9BXJ1 281 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 CADM1Q9BY67 442 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ROPN1BQ9BZX4 212 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 POLR1EQ9GZS1 481 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 C2orf40Q9H1Z8 148 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TTYH1Q9H313 450 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ROPN1Q9HAT0 212 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 PDP1Q9P0J1 537 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ABCD2Q9UBJ2 740 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 CA14Q9ULX7 337 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 LAMB2P55268 1798 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 GON4LQ3T8J9 2241 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 A0A0A6YYK5 440 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TRABD2BA6NFA1 517 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 CCDC154A6NI56 674 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 KPNA3O00505 521 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 DHX15O43143 795 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TLL1O43897 1013 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 LPXNO60711 386 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 DEAF1O75398 565 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 GSTP1P09211 210 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ICAM3P32942 547 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 AHRP35869 848 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 RPL26P61254 145 aaKnown RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 EHHADHQ08426 723 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ETFDHQ16134 617 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 KLHL22Q53GT1 634 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 OGFOD3Q6PK18 319 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 C7orf43Q8WVR3 580 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 NKD2Q969F2 451 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-212ENST00000543766 RFT1Q96AA3 541 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 PWWP2AQ96N64 755 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 KCNJ15Q99712 375 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 SPON2Q9BUD6 331 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ADAMTS6Q9UKP5 1117 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 AMFRQ9UKV5 643 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ZNF451Q9Y4E5 1061 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 PITPNM2Q9BZ72 1349 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 VSTM2BA6NLU5 285 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 PTGES3LE9PB15 166 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 E9PI62 339 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 SEC14L5O43304 696 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TGOLN2O43493 480 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TGM5O43548 720 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ATG12O94817 140 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 OR8G3PP0DMU2 310 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 ALDH3A2P51648 485 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 TARDBPQ13148 414 aaKnown RBP eCLIP8.73□□□□□ -1.013e-8■■■□□ 14.8
VPS13D-212ENST00000543766 SLC29A2Q14542 456 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 CLINT1Q14677 625 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 PFKFB4Q16877 469 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 OR2B11Q5JQS5 317 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 HACD4Q5VWC8 232 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 FAM171BQ6P995 826 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 BRAT1Q6PJG6 821 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 GPBP1Q86WP2 473 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 METTL13Q8N6R0 699 aa8.73□□□□□ -1.01
VPS13D-212ENST00000543766 RCBTB1Q8NDN9 531 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms