RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 XKR7Q5GH72 579 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 LETMD1Q6P1Q0 360 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 C11orf96Q7Z7L8 435 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 MRGPRX1Q96LB2 322 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 FOPNLQ96NB1 174 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 CATSPER2Q96P56 530 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 CDX2Q99626 313 aaPredicted RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 NTMT1Q9BV86 223 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 SLC17A9Q9BYT1 436 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 C1orf21Q9H246 121 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 DPEP2Q9H4A9 486 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 SLC32A1Q9H598 525 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 MBNL1Q9NR56 388 aaKnown RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 TRPS1Q9UHF7 1281 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 L3MBTL1Q9Y468 752 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 ANGPTL3Q9Y5C1 460 aa9.11□□□□□ -0.95
GNE-206ENST00000543356 COPG1Q9Y678 874 aaKnown RBP9.11□□□□□ -0.95
GNE-206ENST00000543356 ARHGEF33A8MVX0 844 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 H3BM21 787 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 KATNA1O75449 491 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 POP7O75817 140 aaKnown RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 ANP32DO95626 131 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 KRT16P08779 473 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 EBLN1P0CF75 366 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 MYCLP1P12525 358 aaPredicted RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 EPB42P16452 691 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 NDUFV2P19404 249 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 MAP4P27816 1152 aaKnown RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 PIK3R1P27986 724 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 CCNG1P51959 295 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 RPA4Q13156 261 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 MLF2Q15773 248 aaPredicted RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 TMEM198Q66K66 360 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 TMEM92Q6UXU6 159 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 LRRTM4Q86VH4 590 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 DDIASQ8IXT1 998 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 LILRA3Q8N6C8 439 aaPredicted RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 OR4F6Q8NGB9 312 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 ZFAND2BQ8WV99 257 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 ATL1Q8WXF7 558 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 C3orf30Q96M34 536 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 MIPEPQ99797 713 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 TBC1D10AQ9BXI6 508 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 PHPT1Q9NRX4 125 aaPredicted RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.1□□□□□ -0.95
GNE-206ENST00000543356 FAM8A1Q9UBU6 413 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 DUSP12Q9UNI6 340 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 LOC730098B7Z3J9 87 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 UBDO15205 165 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 PRR35P0CG20 571 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 ACADMP11310 421 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 COX4I1P13073 169 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 FOSL2P15408 326 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 ABRQ12979 859 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 INPP5AQ14642 412 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 CRTC3Q6UUV7 619 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 CFAP206Q8IYR0 622 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
GNE-206ENST00000543356 ATP6V1E2Q96A05 226 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 CCDC138Q96M89 665 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 LGR4Q9BXB1 951 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 AKTIPQ9H8T0 292 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 TAS2R1Q9NYW7 299 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 POLG2Q9UHN1 485 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 BTRCQ9Y297 605 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 TMEM98Q9Y2Y6 226 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 TIMM22Q9Y584 194 aa9.1□□□□□ -0.95
GNE-206ENST00000543356 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TCRBV21S2A2A0A5A6 115 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 B2RBV5 119 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 GYG2O15488 501 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 WDR47O94967 919 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PAK4O96013 591 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 CAPN1P07384 714 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 THRAP10827 490 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 HGFP14210 728 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PDHA2P29803 388 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 IGFALSP35858 605 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 GDF5P43026 501 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 CPA2P48052 419 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 MRPL19P49406 292 aaKnown RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 MLLT1Q03111 559 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 CUL3Q13618 768 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PTK2BQ14289 1009 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 ZXDCQ2QGD7 858 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 GGTA1PQ4G0N0 100 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 DNAL1Q4LDG9 190 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 FAM219BQ5XKK7 198 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 PTCRAQ6ISU1 281 aaPredicted RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 OGFOD2Q6N063 350 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 DOK6Q6PKX4 331 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 KIAA1324Q6UXG2 1013 aaKnown RBP9.09□□□□□ -0.95
GNE-206ENST00000543356 UNC5DQ6UXZ4 953 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 MILR1Q7Z6M3 343 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 TRIM69Q86WT6 500 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 CDYL2Q8N8U2 506 aa9.09□□□□□ -0.95
GNE-206ENST00000543356 DENND6BQ8NEG7 585 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms