RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 PRKCQQ04759 706 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 ABRAXAS2Q15018 415 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 PHKG1Q16816 387 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 KCTD21Q4G0X4 260 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 LDLRAP1Q5SW96 308 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 DPPA4Q7L190 304 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 MRPL43Q8N983 215 aaKnown RBP9.65□□□□□ -0.86
SS18-205ENST00000542420 ZFP28Q8NHY6 868 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 PHOSPHO2Q8TCD6 241 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 DIS3LQ8TF46 1054 aaKnown RBP9.65□□□□□ -0.86
SS18-205ENST00000542420 SLC13A3Q8WWT9 602 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 ATL1Q8WXF7 558 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 TESCQ96BS2 214 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 FBXL8Q96CD0 374 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 CMTM7Q96FZ5 175 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 TEX37Q96LM6 180 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 NSMCE2Q96MF7 247 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 CORO1BQ9BR76 489 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 RHBDL2Q9NX52 303 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 UBAP1Q9NZ09 502 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 MUC22E2RYF6 1773 aaPredicted RBP9.65□□□□□ -0.86
SS18-205ENST00000542420 KIAA1549LQ6ZVL6 1849 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 MYOFQ9NZM1 2061 aa9.65□□□□□ -0.86
SS18-205ENST00000542420 KCNE1BA0A087WTH5 132 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 TRIM43BA6NCK2 446 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 TRIM64CA6NLI5 447 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 UPK3BL1B0FP48 263 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 UPK3BL2E5RIL1 263 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 MOSPD3O75425 235 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 GMNNO75496 209 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 PRSS23O95084 383 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 SCELO95171 688 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 CLPTM1O96005 669 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 HPRP00739 348 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 G6PDP11413 515 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 POLR2EP19388 210 aaKnown RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 GGT1P19440 569 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 MYF6P23409 242 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 CLDN8P56748 225 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 MYBPC1Q00872 1141 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 B4GALNT1Q00973 533 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 ABRQ12979 859 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 CSTF3Q12996 717 aaKnown RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 PTPRRQ15256 657 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 LRRC26Q2I0M4 334 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 ATP13A5Q4VNC0 1218 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 TIGD2Q4W5G0 525 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 NHSL2Q5HYW2 709 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 LRIF1Q5T3J3 769 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 LIPJQ5W064 366 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 ATG9BQ674R7 924 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 PDE12Q6L8Q7 609 aaKnown RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 CYP2R1Q6VVX0 501 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 DPY19L3Q6ZPD9 716 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 TSPAN33Q86UF1 283 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 ADIPOR2Q86V24 386 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 FBXO15Q8NCQ5 510 aaPredicted RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 OR6K2Q8NGY2 324 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 MCOLN3Q8TDD5 553 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 BPIFB1Q8TDL5 484 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 TFAP2CQ92754 450 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 GLMNQ92990 594 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 PPWD1Q96BP3 646 aaKnown RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 TRIM43Q96BQ3 446 aaPredicted RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 DGCR14Q96DF8 476 aaKnown RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 HHIPQ96QV1 700 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 SLC39A3Q9BRY0 314 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 BEGAINQ9BUH8 593 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 BDH2Q9BUT1 245 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 UGT2B28Q9BY64 529 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 DPY30Q9C005 99 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 OLAHQ9NV23 265 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 B4GALT6Q9UBX8 382 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 ERVW-1Q9UQF0 538 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 PDE10AQ9Y233 779 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 WDR37Q9Y2I8 494 aa9.65□□□□□ -0.87
SS18-205ENST00000542420 POLR3HQ9Y535 204 aaPredicted RBP9.65□□□□□ -0.87
SS18-205ENST00000542420 C7orf72A4D263 438 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 TRIM64A6NGJ6 449 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 H0Y858 1186 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 SLCO2B1O94956 709 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ANXA6P08133 673 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CCR7P32248 378 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CA5AP35218 305 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 EPS8Q12929 822 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CBX3Q13185 183 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CAPRIN1Q14444 709 aaKnown RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 IMPG1Q17R60 797 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 USP39Q53GS9 565 aaKnown RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 PRSS36Q5K4E3 855 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 UBE2R2Q712K3 238 aaPredicted RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 ZNF765Q7L2R6 523 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 SPPL2CQ8IUH8 684 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 OR2A12Q8NGT7 310 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 FRS2Q8WU20 508 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ASZ1Q8WWH4 475 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 VPS33AQ96AX1 596 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 LRCH3Q96II8 777 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 C1orf50Q9BV19 199 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms