RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 RPA4Q13156 261 aa19.21■□□□□ 0.67
DDX11-220ENST00000542244 ATP1A4Q13733 1029 aa19.21■□□□□ 0.67
DDX11-220ENST00000542244 ZNF534Q76KX8 674 aa19.21■□□□□ 0.67
DDX11-220ENST00000542244 HDAC10Q969S8 669 aa19.21■□□□□ 0.67
DDX11-220ENST00000542244 HES6Q96HZ4 224 aa19.21■□□□□ 0.67
DDX11-220ENST00000542244 BAG1Q99933 345 aaPredicted RBP19.21■□□□□ 0.67
DDX11-220ENST00000542244 TDRKHQ9Y2W6 561 aaKnown RBP19.21■□□□□ 0.67
DDX11-220ENST00000542244 FER1L5A0AVI2 2057 aa19.21■□□□□ 0.67
DDX11-220ENST00000542244 USP9XQ93008 2570 aaPredicted RBP19.21■□□□□ 0.67
DDX11-220ENST00000542244 TTLL8A6PVC2 850 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 IQCF5A8MTL0 148 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 TMEM63AO94886 807 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 AP2A2O94973 939 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 GOT2P00505 430 aaKnown RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 CHRM5P08912 532 aaPredicted RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 CETN2P41208 172 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 SLC9A5Q14940 896 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 NCF4Q15080 339 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 PAPD7Q5XG87 772 aaKnown RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 LDB1Q86U70 411 aaPredicted RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 C2orf73Q8N5S3 287 aaPredicted RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 C19orf47Q8N9M1 422 aaKnown RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 Q8NA96 180 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 CALR3Q96L12 384 aaKnown RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 PPP1R2P1Q96PQ5 205 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 PSMG3-AS1Q96PY0 264 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 FANCEQ9HB96 536 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 ASF1AQ9Y294 204 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 PCDHGA9Q9Y5G4 932 aaKnown RBP19.2■□□□□ 0.66
DDX11-220ENST00000542244 PIKFYVEQ9Y2I7 2098 aa19.2■□□□□ 0.66
DDX11-220ENST00000542244 BLACEA4D250 179 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 E7EQ34 232 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 MATN2O00339 956 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 KLF7O75840 302 aaPredicted RBP19.19■□□□□ 0.66
DDX11-220ENST00000542244 SORBS2O94875 1100 aaKnown RBP19.19■□□□□ 0.66
DDX11-220ENST00000542244 IPO7O95373 1038 aaKnown RBP19.19■□□□□ 0.66
DDX11-220ENST00000542244 MSL3P1P0C860 447 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 CCR7P32248 378 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 NSG1P42857 185 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 OASLQ15646 514 aaKnown RBP19.19■□□□□ 0.66
DDX11-220ENST00000542244 PACS1Q6VY07 963 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 FAM26EQ8N5C1 309 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 UBL4BQ8N7F7 174 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 TTC13Q8NBP0 860 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 C1orf54Q8WWF1 131 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 DHCR7Q9UBM7 475 aaKnown RBP19.19■□□□□ 0.66
DDX11-220ENST00000542244 SERTAD3Q9UJW9 196 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 CDYLQ9Y232 598 aa19.19■□□□□ 0.66
DDX11-220ENST00000542244 KRT87PA6NCN2 255 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 GOLGA6L9A6NEM1 432 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 LIN7AO14910 233 aaPredicted RBP19.18■□□□□ 0.66
DDX11-220ENST00000542244 LIASO43766 372 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 PTMAP06454 111 aaKnown RBP19.18■□□□□ 0.66
DDX11-220ENST00000542244 ZSCAN5DPP0CG00 497 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 SNX1Q13596 522 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 GRB7Q14451 532 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 ITIH4Q14624 930 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 TSTD2Q5T7W7 516 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 SPNS2Q8IVW8 549 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 KRT222Q8N1A0 295 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 RBMXL3Q8N7X1 1067 aaKnown RBP19.18■□□□□ 0.66
DDX11-220ENST00000542244 CPT1CQ8TCG5 803 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 IL17FQ96PD4 163 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 MENTQ9BUN1 341 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 VPS37BQ9H9H4 285 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 MARCH4Q9P2E8 410 aaPredicted RBP19.18■□□□□ 0.66
DDX11-220ENST00000542244 MAP4K5Q9Y4K4 846 aa19.18■□□□□ 0.66
DDX11-220ENST00000542244 MIF4GDA9UHW6 222 aaKnown RBP19.17■□□□□ 0.66
DDX11-220ENST00000542244 OTX2P32243 289 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 P3H1Q32P28 736 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 MLIPQ5VWP3 458 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 DNAJC22Q8N4W6 341 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 ZNF655Q8N720 491 aaPredicted RBP19.17■□□□□ 0.66
DDX11-220ENST00000542244 DNAAF3Q8N9W5 541 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 LINC01555Q8NAE3 123 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 SPC24Q8NBT2 197 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 SEC14L1Q92503 715 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 GBP5Q96PP8 586 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 SYTL2Q9HCH5 934 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 SLC22A11Q9NSA0 550 aa19.17■□□□□ 0.66
DDX11-220ENST00000542244 USP9YO00507 2555 aaPredicted RBP19.17■□□□□ 0.66
DDX11-220ENST00000542244 OR2B3O76000 313 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 SUN1O94901 812 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 IFNB1P01574 187 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 ITGAXP20702 1163 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 SHMT2P34897 504 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 JMJD6Q6NYC1 403 aaPredicted RBP19.16■□□□□ 0.66
DDX11-220ENST00000542244 TAX1BP1Q86VP1 789 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 TBC1D21Q8IYX1 336 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 DTWD1Q8N5C7 304 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 OR5K2Q8NHB8 316 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 SLC7A5P2Q9GIP4 190 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 CASS4Q9NQ75 786 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 SNRNP200O75643 2136 aaKnown RBP19.16■□□□□ 0.66
DDX11-220ENST00000542244 SHANK1Q9Y566 2161 aa19.16■□□□□ 0.66
DDX11-220ENST00000542244 CCDC88CQ9P219 2028 aa19.15■□□□□ 0.66
DDX11-220ENST00000542244 A0A0J9YY10 115 aa19.15■□□□□ 0.66
DDX11-220ENST00000542244 PSMD3O43242 534 aa19.15■□□□□ 0.66
DDX11-220ENST00000542244 KRT86O43790 486 aa19.15■□□□□ 0.66
DDX11-220ENST00000542244 SEMA7AO75326 666 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms