RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 DOK6Q6PKX4 331 aa16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 RASGRP3Q8IV61 690 aa16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 PROKR1Q8TCW9 393 aa16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 NTMT1Q9BV86 223 aa16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 ACTR8Q9H981 624 aa16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 ZNF490Q9ULM2 529 aaPredicted RBP16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 POLR3HQ9Y535 204 aaPredicted RBP16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 TICRRQ7Z2Z1 1910 aa16.83■□□□□ 0.28
TMEM50B-210ENST00000542230 A0A1W2PP55 124 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 PRR23AA6NEV1 266 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 MAP3K7O43318 606 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 DNAJA2O60884 412 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 VPS4BO75351 444 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 PFN3P60673 137 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 MAPRE2Q15555 327 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 TMEM52BQ4KMG9 183 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 PAGE3Q5JUK9 113 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 IL23RQ5VWK5 629 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 MCOLN3Q8TDD5 553 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 MKRN2Q9H000 416 aaKnown RBP16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 TM7SF3Q9NS93 570 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 FXYD1O00168 92 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 EIF3FO00303 357 aaPredicted RBP16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 MANBAO00462 879 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 KIR2DL1P43626 348 aaPredicted RBP16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 PTGR1Q14914 329 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 ZRSR2Q15696 482 aaKnown RBP16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 CST6Q15828 149 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 GSTA3Q16772 222 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 C8orf82Q6P1X6 216 aaPredicted RBP16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 EFL1Q7Z2Z2 1120 aaKnown RBP16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 SPATA19Q7Z5L4 167 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 KBTBD2Q8IY47 623 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 RGL4Q8IZJ4 473 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 CXorf40AQ8TE69 158 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 HDAC8Q9BY41 377 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 RIC8BQ9NVN3 520 aa16.82■□□□□ 0.28
TMEM50B-210ENST00000542230 C1QTNF3-AMACRE9PGA6 284 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 H3BNX3 289 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 NPC1O15118 1278 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 ULK1O75385 1050 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 PSIP1O75475 530 aaKnown RBP16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 PCDH8O95206 1070 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 PDYNP01213 254 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 PCCBP05166 539 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 SLC2A4P14672 509 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 SLC7A2P52569 658 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 RPL38P63173 70 aaKnown RBP16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 TIGD2Q4W5G0 525 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 LRRC74BQ6ZQY2 392 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 FAM83HQ6ZRV2 1179 aaPredicted RBP16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 KBTBD6Q86V97 674 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 SPDL1Q96EA4 605 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 ZNF570Q96NI8 536 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 TRIM54Q9BYV2 358 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 BRINP2Q9C0B6 783 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 ZNF576Q9H609 170 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 MBNL1Q9NR56 388 aaKnown RBP16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 NMRK1Q9NWW6 199 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 ACOT8O14734 319 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 KPNA5O15131 536 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 SLC22A3O75751 556 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 CLDN9O95484 217 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 SLC16A8O95907 504 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 ENO2P09104 434 aaPredicted RBP16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 GSTM1P09488 218 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 EBLN1P0CF75 366 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 CD22P20273 847 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 CYP2A7P20853 494 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 ME2P23368 584 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 CASP2P42575 452 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 MRPS22P82650 360 aaKnown RBP16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 PLIN5Q00G26 463 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 GSTM4Q03013 218 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 CDC16Q13042 620 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 FLOT2Q14254 428 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 NFE2L1Q14494 772 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 COL13A1Q5TAT6 717 aaPredicted RBP16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 ADNP2Q6IQ32 1131 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 SLC22A15Q8IZD6 547 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 STOML1Q9UBI4 398 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 CROTQ9UKG9 612 aa16.81■□□□□ 0.28
TMEM50B-210ENST00000542230 SOX11P35716 441 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 DGKQP52824 942 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 CDKL1Q00532 357 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 NAE1Q13564 534 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 FGL2Q14314 439 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 LRRC36Q1X8D7 754 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 WSCD2Q2TBF2 565 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 DSG4Q86SJ6 1040 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 HDDC3Q8N4P3 179 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 BHLHE22Q8NFJ8 381 aaPredicted RBP16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 CLHC1Q8NHS4 586 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 MED8Q96G25 268 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 OR4K3Q96R72 315 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 PKP4Q99569 1192 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 ACPTQ9BZG2 426 aa16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 RSPH9Q9H1X1 276 aaPredicted RBP16.8■□□□□ 0.28
TMEM50B-210ENST00000542230 SLC23A2Q9UGH3 650 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms