RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 NSG1P42857 185 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 CTSKP43235 329 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 ERVPABLB-1P60509 514 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 PHKG1Q16816 387 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 RGS21Q2M5E4 152 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 DENND5AQ6IQ26 1287 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 SNX20Q7Z614 316 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 AQP12AQ8IXF9 295 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 RNF175Q8N4F7 328 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 TRPV1Q8NER1 839 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 MTERF3Q96E29 417 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 DERL2Q9GZP9 239 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 SUV39H2Q9H5I1 410 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 PLAC1Q9HBJ0 212 aa15.77■□□□□ 0.12
VARS2-212ENST00000542001 XIRP1Q702N8 1843 aaKnown RBP15.77■□□□□ 0.12
VARS2-212ENST00000542001 MAT2AP31153 395 aaKnown RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 PLA2G16P53816 162 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 AP1S1P61966 158 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 DAG1Q14118 895 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 CASP12Q6UXS9 341 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 RETREG3Q86VR2 466 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 TMEM173Q86WV6 379 aaPredicted RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 UBE2J2Q8N2K1 259 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 ZNF461Q8TAF7 563 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 FUBP1Q96AE4 644 aaKnown RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 PPCDCQ96CD2 204 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 OTUB1Q96FW1 271 aaPredicted RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 DPH2Q9BQC3 489 aaPredicted RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 RTP3Q9BQQ7 232 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 OR2AG1Q9H205 316 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 CMTM6Q9NX76 183 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 SRRDQ9UH36 339 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 ZNF840PA6NDX5 716 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 PSMD11O00231 422 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 ALDOCP09972 364 aaKnown RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 HLA-EP13747 358 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 ARCN1P48444 511 aaKnown RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 DNAJB13P59910 316 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 USP39Q53GS9 565 aaKnown RBP15.77■□□□□ 0.11
VARS2-212ENST00000542001 MORN1Q5T089 497 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 KCTD11Q693B1 232 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 SULT1C3Q6IMI6 304 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 LETMD1Q6P1Q0 360 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 ARMC5Q96C12 935 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 CHCHD6Q9BRQ6 235 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 TNFRSF12AQ9NP84 129 aa15.77■□□□□ 0.11
VARS2-212ENST00000542001 FAM220BPB1ANY3 271 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 TFECO14948 347 aaPredicted RBP15.76■□□□□ 0.11
VARS2-212ENST00000542001 RAP2AP10114 183 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 HNF1BP35680 557 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 MANFP55145 182 aaKnown RBP15.76■□□□□ 0.11
VARS2-212ENST00000542001 TRAP1Q12931 704 aaKnown RBP15.76■□□□□ 0.11
VARS2-212ENST00000542001 HSPB3Q12988 150 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 DGUOKQ16854 277 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 ELMSAN1Q6PJG2 1045 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.76■□□□□ 0.11
VARS2-212ENST00000542001 SH2D5Q6ZV89 423 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 TRIM48Q8IWZ4 208 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 C1orf52Q8N6N3 182 aaKnown RBP15.76■□□□□ 0.11
VARS2-212ENST00000542001 LINC01465Q8N7H1 131 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 TOR3AQ9H497 397 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 RPS6KA6Q9UK32 745 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 COQ6Q9Y2Z9 468 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 SHROOM3Q8TF72 1996 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 MAGEB3O15480 346 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 MAPK8P45983 427 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 BDKRB1P46663 353 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 OR1E2P47887 323 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 CCNYL2Q5T2Q4 361 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 OGFRL1Q5TC84 451 aaPredicted RBP15.76■□□□□ 0.11
VARS2-212ENST00000542001 C17orf99Q6UX52 265 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 KREMEN2Q8NCW0 462 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 MDGA1Q8NFP4 955 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 NLNQ9BYT8 704 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 HMG20AQ9NP66 347 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 NLE1Q9NVX2 485 aaPredicted RBP15.76■□□□□ 0.11
VARS2-212ENST00000542001 B4GALT6Q9UBX8 382 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 EBF1Q9UH73 591 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 HNRNPCL2B2RXH8 293 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 CLIC1O00299 241 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 KDELR3O43731 214 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 BUD31P41223 144 aaPredicted RBP15.76■□□□□ 0.11
VARS2-212ENST00000542001 RFX4Q33E94 735 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 CES5AQ6NT32 575 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 PGBD5Q8N414 524 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 C7orf57Q8NEG2 295 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 C1orf74Q96LT6 269 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 SLC30A3Q99726 388 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 YIPF4Q9BSR8 244 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 TEX12Q9BXU0 123 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 OR51B5Q9H339 312 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 MEAF6Q9HAF1 191 aa15.76■□□□□ 0.11
VARS2-212ENST00000542001 PGLSO95336 258 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 NR2F1P10589 423 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 ENGP17813 658 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 MXD1Q05195 221 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 CST9Q5W186 159 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 VN1R5Q7Z5H4 357 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 CEP44Q9C0F1 390 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 Q9Y3F1 56 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms