RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ARHGEF33A8MVX0 844 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 B4DGG1 531 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 TARM1B6A8C7 271 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 LMO7DNF2Z398 122 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 FFAR2O15552 330 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 PRPF4O43172 522 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDX55-208ENST00000541259 PLIN3O60664 434 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 PSIP1O75475 530 aaKnown RBP9.1□□□□□ -0.95
DDX55-208ENST00000541259 PROCP04070 461 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 SYPP08247 313 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 SLC35G4P0C7Q5 338 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 TPBGLP0DKB5 382 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 F3P13726 295 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 EPHA8P29322 1005 aaPredicted RBP9.1□□□□□ -0.95
DDX55-208ENST00000541259 ARRB1P49407 418 aaPredicted RBP9.1□□□□□ -0.95
DDX55-208ENST00000541259 PLOD1Q02809 727 aaPredicted RBP9.1□□□□□ -0.95
DDX55-208ENST00000541259 SPEM2Q0P670 501 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 PRKG2Q13237 762 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 ACAP2Q15057 778 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 PHKG1Q16816 387 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 PPP1R3AQ16821 1122 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 TSNAXIP1Q2TAA8 658 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 HSP90B2PQ58FF3 399 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.1□□□□□ -0.95
DDX55-208ENST00000541259 KLC3Q6P597 504 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 IYDQ6PHW0 289 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 ABRAXAS1Q6UWZ7 409 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 WASH2PQ6VEQ5 465 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 MBOAT1Q6ZNC8 495 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 GKN2Q86XP6 184 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 NAGSQ8N159 534 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 ANKRD42Q8N9B4 389 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 LMNTD1Q8N9Z9 388 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 OR5AR1Q8NGP9 310 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 MDM1Q8TC05 714 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 SAP25Q8TEE9 199 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 DENND1AQ8TEH3 1009 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 ZDHHC1Q8WTX9 485 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 EXT2Q93063 718 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 KIAA1191Q96A73 305 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 TSNARE1Q96NA8 513 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 FERD3LQ96RJ6 166 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 ATOH8Q96SQ7 321 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 SELENOSQ9BQE4 189 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 MLXIPLQ9NP71 852 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 MED4Q9NPJ6 270 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 WASH6PQ9NQA3 447 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 IMP3Q9NV31 184 aaKnown RBP9.1□□□□□ -0.95
DDX55-208ENST00000541259 UTP6Q9NYH9 597 aaKnown RBP9.1□□□□□ -0.95
DDX55-208ENST00000541259 SIRPGQ9P1W8 387 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 XPR1Q9UBH6 696 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 DOLKQ9UPQ8 538 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 PDE10AQ9Y233 779 aa9.1□□□□□ -0.95
DDX55-208ENST00000541259 LNP1A1A4G5 178 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 NCF1BA6NI72 391 aaPredicted RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 NCF1CA8MVU1 366 aaPredicted RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 G3V2L1 256 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 UBXN8O00124 270 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 IFRD1O00458 451 aaPredicted RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 NOBOXO60393 691 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 C1orf105O95561 183 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 CER1O95813 267 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 GUCA1CO95843 209 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 LMNAP02545 664 aaKnown RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 C8GP07360 202 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 ANXA6P08133 673 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 ZNF806P0C7X5 589 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 MTHFD1P11586 935 aaKnown RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 MYF5P13349 255 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 NCF1P14598 390 aaPredicted RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 ETV4P43268 484 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 WDR4P57081 412 aaKnown RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 PPP2R2AP63151 447 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 GPS2Q13227 327 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 GRB7Q14451 532 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 C18orf21Q32NC0 220 aaPredicted RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 FBXO48Q5FWF7 155 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 IL27RAQ6UWB1 636 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 UNC5DQ6UXZ4 953 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 LCA5Q86VQ0 697 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 GPSM1Q86YR5 675 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 MINDY1Q8N5J2 469 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 RHEBL1Q8TAI7 183 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 STAG3L4Q8TBR4 150 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 MGARPQ8TDB4 240 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 JPH3Q8WXH2 748 aaPredicted RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 FOPNLQ96NB1 174 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 MRPL57Q9BQC6 102 aaKnown RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 SLC12A9Q9BXP2 914 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 IQCGQ9H095 443 aaKnown RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 IRF2BPLQ9H1B7 796 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 KCNH6Q9H252 994 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 MRPL46Q9H2W6 279 aaKnown RBP9.09□□□□□ -0.95
DDX55-208ENST00000541259 PARVBQ9HBI1 364 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 PARD6AQ9NPB6 346 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 RXFP3Q9NSD7 469 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 FAM53CQ9NYF3 392 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 RAPGEFL1Q9UHV5 662 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 RNF112Q9ULX5 631 aa9.09□□□□□ -0.95
DDX55-208ENST00000541259 PLAGL1Q9UM63 463 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms