RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TAS2R42Q7RTR8 314 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CMC1Q7Z7K0 106 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 C10orf107Q8IVU9 208 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 C10orf67Q8IYJ2 551 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 FSTL5Q8N475 847 aaPredicted RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 ZSCAN1Q8NBB4 408 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 GALNT11Q8NCW6 608 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 WDR36Q8NI36 951 aaKnown RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 C9orf43Q8TAL5 461 aaPredicted RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 MAPK15Q8TD08 544 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 C10orf82Q8WW14 230 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 LPGAT1Q92604 370 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 EXOC2Q96KP1 924 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 UBXN10Q96LJ8 280 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 MCCC1Q96RQ3 725 aaPredicted RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 BTBD1Q9H0C5 482 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 SLCO1B3Q9NPD5 702 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.21□□□□□ -1.1
CHD4-208ENST00000540960 THAP10Q9P2Z0 257 aaPredicted RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 NFKBIL1Q9UBC1 381 aaPredicted RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 GGT7Q9UJ14 662 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 ERRFI1Q9UJM3 462 aaPredicted RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 HAO1Q9UJM8 370 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 TUBD1Q9UJT1 453 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 EMCNQ9ULC0 261 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 SLC12A4Q9UP95 1085 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 TNPO3Q9Y5L0 923 aaKnown RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 OAS3Q9Y6K5 1087 aaKnown RBP8.21□□□□□ -1.1
CHD4-208ENST00000540960 RTTNQ86VV8 2226 aa8.21□□□□□ -1.1
CHD4-208ENST00000540960 CROCCQ5TZA2 2017 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 EDDM13A0A1B0GTR0 161 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 UBA6A0AVT1 1052 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 TSPAN11A1L157 253 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CCDC78A2IDD5 438 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 G3V2L1 256 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 HDAC3O15379 428 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 PHGDHO43175 533 aaKnown RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 IPO13O94829 963 aaKnown RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 AP2A2O94973 939 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 UNC5CO95185 931 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 MLYCDO95822 493 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 MT-CO1P00395 513 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 S100BP04271 92 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 SERPINA6P08185 405 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 FGF3P11487 239 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 ENO3P13929 434 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 HGFP14210 728 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ALOX15P16050 662 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 IMPDH1P20839 514 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CALB2P22676 271 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 DGKAP23743 735 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 NSG1P42857 185 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 SCTRP47872 440 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 RPL14P50914 215 aaKnown RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 ARSDP51689 593 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CCNHP51946 323 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 DCDC1P59894 354 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ELP6Q0PNE2 266 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ZNF805Q5CZA5 627 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CDKL4Q5MAI5 379 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ATXN7L2Q5T6C5 722 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 FAM46CQ5VWP2 391 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 PTRHD1Q6GMV3 140 aaKnown RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 C16orf46Q6P387 395 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ADAMTSL2Q86TH1 951 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 HEATR4Q86WZ0 1026 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ZFAND4Q86XD8 727 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CAMK1DQ8IU85 385 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 NRSN1Q8IZ57 195 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 TMIEQ8NEW7 156 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 OR13C4Q8NGS5 318 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 OR6Y1Q8NGX8 325 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 KCTD4Q8WVF5 259 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 SORCS1Q8WY21 1168 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 OR8D1Q8WZ84 308 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 BHMTQ93088 406 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 KIAA1191Q96A73 305 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 RAB7BQ96AH8 199 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CMTM5Q96DZ9 223 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 DCUN1D1Q96GG9 259 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ABHD17AQ96GS6 310 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 NSL1Q96IY1 281 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 APOLD1Q96LR9 279 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 MAGEB10Q96LZ2 347 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 TMEM237Q96Q45 408 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 MDFIQ99750 246 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CCDC28BQ9BUN5 200 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 TMEM120AQ9BXJ8 343 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 TRIM54Q9BYV2 358 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 TM6SF2Q9BZW4 377 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 MMADHCQ9H3L0 296 aaPredicted RBP8.2□□□□□ -1.1
CHD4-208ENST00000540960 CAB39LQ9H9S4 337 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 FBRSQ9HAH7 460 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 DYRK4Q9NR20 520 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 ELOVL2Q9NXB9 296 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 NDE1Q9NXR1 346 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 XPR1Q9UBH6 696 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 HEY2Q9UBP5 337 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 CRLS1Q9UJA2 301 aa8.2□□□□□ -1.1
CHD4-208ENST00000540960 DCTN4Q9UJW0 460 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms