RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 SHEQ5VZ18 495 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 METRNLQ641Q3 311 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 ATG9BQ674R7 924 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 TMEM211Q6ICI0 200 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 TTLL10Q6ZVT0 673 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 NDUFAF7Q7L592 441 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 HOOK3Q86VS8 718 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 CPAMD8Q8IZJ3 1885 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 CIARTQ8N365 385 aaPredicted RBP7.82□□□□□ -1.16
KLHL42-203ENST00000540301 ATPAF2Q8N5M1 289 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 BEND7Q8N7W2 519 aaPredicted RBP7.82□□□□□ -1.16
KLHL42-203ENST00000540301 C19orf47Q8N9M1 422 aaKnown RBP7.82□□□□□ -1.16
KLHL42-203ENST00000540301 C3orf20Q8ND61 904 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 ACVR1CQ8NER5 493 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 MYRIPQ8NFW9 859 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 GDAP1Q8TB36 358 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 BRSK1Q8TDC3 778 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 LCN9Q8WX39 176 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 TMEM158Q8WZ71 300 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 RND1Q92730 232 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 C8orf44Q96CB5 159 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 TRIM51Q9BSJ1 452 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 CNPY3Q9BT09 278 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 VPS16Q9H269 839 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 RAD18Q9NS91 495 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 TMPRSS11EQ9UL52 423 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 L3MBTL1Q9Y468 752 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 ASB1Q9Y576 335 aa7.82□□□□□ -1.16
KLHL42-203ENST00000540301 DNMT3AQ9Y6K1 912 aaPredicted RBP7.82□□□□□ -1.16
KLHL42-203ENST00000540301 A0A1B0GX78 115 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ASPDHA6ND91 283 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ANKRD66B4E2M5 251 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 H7C1Q1 480 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 SMAD7O15105 426 aaKnown RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 SLC4A1P02730 911 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 DESP17661 470 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CES1P23141 567 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 PBLDP30039 288 aaPredicted RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 HCAR3P49019 387 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 RAB28P51157 221 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 RPL7AP62424 266 aaKnown RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 DPYSQ14117 519 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ZIC1Q15915 447 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ERMARDQ5T6L9 678 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ABHD17BQ5VST6 288 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 TXNRD3NBQ6F5E7 133 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 TMEM220Q6QAJ8 160 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 C16orf47Q6ZP98 133 aaPredicted RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 COX15Q7KZN9 410 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CCDC71Q8IV32 467 aaPredicted RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 SIAH3Q8IW03 269 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CHERPQ8IWX8 916 aaKnown RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 TEX26Q8N6G2 289 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 RASGEF1AQ8N9B8 481 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 DENND1AQ8TEH3 1009 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 DLG3Q92796 817 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ZNF653Q96CK0 615 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 MCEEQ96PE7 176 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 VPS35Q96QK1 796 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 TUBGCP2Q9BSJ2 902 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CRB3Q9BUF7 120 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 SNRNP25Q9BV90 132 aaKnown RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CLSTN2Q9H4D0 955 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 TAS2R14Q9NYV8 317 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ACTR10Q9NZ32 417 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CWC15Q9P013 229 aaKnown RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 ADAM22Q9P0K1 906 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 NFKBIL1Q9UBC1 381 aaPredicted RBP7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CTSFQ9UBX1 484 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 SHOC2Q9UQ13 582 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CTNND2Q9UQB3 1225 aa7.81□□□□□ -1.16
KLHL42-203ENST00000540301 CHD3Q12873 2000 aaKnown RBP7.8□□□□□ -1.16
KLHL42-203ENST00000540301 VSTM2BA6NLU5 285 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 OR2AG2A6NM03 316 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 CRLF1O75462 422 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 FGFR1OPO95684 399 aaKnown RBP7.8□□□□□ -1.16
KLHL42-203ENST00000540301 MT-CYBP00156 380 aaPredicted RBP7.8□□□□□ -1.16
KLHL42-203ENST00000540301 CELA2AP08217 269 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 SLC35G4P0C7Q5 338 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 COX6A1P12074 109 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 NSFP46459 744 aaKnown RBP7.8□□□□□ -1.16
KLHL42-203ENST00000540301 ARSFP54793 590 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 DLX5P56178 289 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 CDR2Q01850 454 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 ZNF33BQ06732 778 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 SYCP1Q15431 976 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 ATP13A5Q4VNC0 1218 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 ALG1LQ6GMV1 187 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 HMBOX1Q6NT76 420 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 DNAJC24Q6P3W2 148 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 CNSTQ6PJW8 725 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 SPESP1Q6UW49 350 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 TMCO3Q6UWJ1 677 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 ARSKQ6UWY0 536 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 RIPOR1Q6ZS17 1223 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 NEK10Q6ZWH5 1172 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 TMC3Q7Z5M5 1100 aa7.8□□□□□ -1.16
KLHL42-203ENST00000540301 FGD2Q7Z6J4 655 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms