RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ZNF549Q6P9A3 640 aa10.89□□□□□ -0.67
PBX1-212ENST00000540236 PSTKQ8IV42 348 aaKnown RBP10.89□□□□□ -0.67
PBX1-212ENST00000540236 LAX1Q8IWV1 398 aa10.89□□□□□ -0.67
PBX1-212ENST00000540236 LARGE2Q8N3Y3 721 aa10.89□□□□□ -0.67
PBX1-212ENST00000540236 SLC9A7Q96T83 725 aa10.89□□□□□ -0.67
PBX1-212ENST00000540236 QRSL1Q9H0R6 528 aaKnown RBP10.89□□□□□ -0.67
PBX1-212ENST00000540236 NDUFS3O75489 264 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 DDX6P26196 483 aaKnown RBP eCLIP10.88□□□□□ -0.67
PBX1-212ENST00000540236 SDC2P34741 201 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 NDST1P52848 882 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TEAD4Q15561 434 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ZNF767PQ75MW2 155 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 EDEM1Q92611 657 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TANKQ92844 425 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 DHRS4Q9BTZ2 278 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ASPNQ9BXN1 380 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 FTHL17Q9BXU8 183 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 YTHDF1Q9BYJ9 559 aaKnown RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 SLC2A6Q9UGQ3 507 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 MKLN1Q9UL63 735 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 LRFN2Q9ULH4 789 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TRBV23-1A0A0A0MS06 115 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 BBIP1A8MTZ0 92 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 INMT-MINDY4F8WBC2 141 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 RFPL3O75679 317 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 FABP3P05413 133 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 CPB1P15086 417 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 CTRB1P17538 263 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 PFKLP17858 780 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 C4BPBP20851 252 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TATDN3Q17R31 274 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 CTRB2Q6GPI1 263 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 DCLRE1AQ6PJP8 1040 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 PQLC3Q8N755 202 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TXNDC5Q8NBS9 432 aaKnown RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 LILRB1Q8NHL6 650 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 MYRFLQ96LU7 910 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 NSUN5Q96P11 429 aaKnown RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 CCNB1IP1Q9NPC3 277 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 LATS2Q9NRM7 1088 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 SLC22A11Q9NSA0 550 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 SLAMF8Q9P0V8 285 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 PPP2R3BQ9Y5P8 575 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 G3V2L1 256 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 FABP7O15540 132 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 CHI3L1P36222 383 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.88□□□□□ -0.67
PBX1-212ENST00000540236 CDK5R2Q13319 367 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 IRF5Q13568 498 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TDGQ13569 410 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 USP39Q53GS9 565 aaKnown RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 FAM209BQ5JX69 171 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 HYIQ5T013 277 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 CORO6Q6QEF8 472 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 BTN2A2Q8WVV5 523 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 AURKBQ96GD4 344 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 ZNF641Q96N77 438 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 OR52E6Q96RD3 313 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 MRPL4Q9BYD3 311 aaKnown RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 SIX6O95475 246 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 LSM8O95777 96 aaKnown RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 CRATP43155 626 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 VSX2P58304 361 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 ZNF33BQ06732 778 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 INSCQ1MX18 579 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ATP13A5Q4VNC0 1218 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 LIPKQ5VXJ0 399 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 LRRC66Q68CR7 880 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 BICRALQ6AI39 1079 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ZNF425Q6IV72 752 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ZFP41Q8N8Y5 198 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 CLEC4CQ8WTT0 213 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 HPDLQ96IR7 371 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 FAM126AQ9BYI3 521 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 KCND2Q9NZV8 630 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 NENFQ9UMX5 172 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 A0A096LPI6 279 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 C2orf74A8MZ97 194 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 BEST1O76090 585 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 C21orf33P30042 268 aaPredicted RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 SLC25A11Q02978 314 aaKnown RBP10.88□□□□□ -0.67
PBX1-212ENST00000540236 PTP4A2Q12974 167 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TIMM50Q3ZCQ8 353 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ELP2Q6IA86 826 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ACAD9Q9H845 621 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 TREM1Q9NP99 234 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 ERAP1Q9NZ08 941 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 SEC14L4Q9UDX3 406 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 GRIP1Q9Y3R0 1128 aa10.88□□□□□ -0.67
PBX1-212ENST00000540236 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
PBX1-212ENST00000540236 DUOX1Q9NRD9 1551 aa10.87□□□□□ -0.67
PBX1-212ENST00000540236 PQBP1O60828 265 aaKnown RBP10.87□□□□□ -0.67
PBX1-212ENST00000540236 GLUD2P49448 558 aa10.87□□□□□ -0.67
PBX1-212ENST00000540236 NKX3-2P78367 333 aa10.87□□□□□ -0.67
PBX1-212ENST00000540236 PTPN11Q06124 597 aaPredicted RBP10.87□□□□□ -0.67
PBX1-212ENST00000540236 NAE1Q13564 534 aa10.87□□□□□ -0.67
PBX1-212ENST00000540236 GNASQ5JWF2 1037 aa10.87□□□□□ -0.67
PBX1-212ENST00000540236 LRRC38Q5VT99 294 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms