RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 GPSM1Q86YR5 675 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NAGSQ8N159 534 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SDR16C5Q8N3Y7 309 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CCDC63Q8NA47 563 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 OR5AR1Q8NGP9 310 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MGARPQ8TDB4 240 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PATE1Q8WXA2 126 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 EXT2Q93063 718 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 GTPBP2Q9BX10 602 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PARVBQ9HBI1 364 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 OARD1Q9Y530 152 aa18.44■□□□□ 0.54
TNFRSF1A-213ENST00000540022 DCDC2BA2VCK2 349 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 G3V2L1 256 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CATP04040 527 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SYPP08247 313 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 DEFB133Q30KQ1 61 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 RDH14Q9HBH5 336 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NKIRAS1Q9NYS0 192 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ZNF624Q9P2J8 865 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CIDEBQ9UHD4 219 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 DOLKQ9UPQ8 538 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CSNK1G3Q9Y6M4 447 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PCNX2A6NKB5 2137 aa18.43■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PRAMEF33A0A0G2JMD5 474 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NEMP2A6NFY4 417 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 UBXN8O00124 270 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 DFNA5O60443 496 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ANXA6P08133 673 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ENO2P09104 434 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 DHRS4L1P0CG22 281 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 GIMD1P0DJR0 217 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MTHFD1P11586 935 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CYP2A7P20853 494 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SLC19A1P41440 591 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 RPIAP49247 311 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ATP1A2P50993 1020 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 STPG1Q5TH74 334 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 FRA10AC1Q70Z53 315 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 KANSL1Q7Z3B3 1105 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 GATAD2AQ86YP4 633 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 FBXO15Q8NCQ5 510 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 OR5K2Q8NHB8 316 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MCOLN3Q8TDD5 553 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ZDHHC1Q8WTX9 485 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 FERD3LQ96RJ6 166 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 EDEM2Q9BV94 578 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 COPG2Q9UBF2 871 aa18.42■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NCF1BA6NI72 391 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SYCE1LA8MT33 242 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NCF1CA8MVU1 366 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 B4DGG1 531 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SUPT3HB4E1H0 165 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 FFAR2O15552 330 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 DLX3O60479 287 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SUPT3HO75486 399 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CER1O95813 267 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 GUCA1CO95843 209 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NCF1P14598 390 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CPA3P15088 417 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CHN1P15882 459 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MAP4P27816 1152 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 FOXK2Q01167 660 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PRKG2Q13237 762 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PCLAFQ15004 111 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ZYG11AQ6WRX3 759 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MBOAT1Q6ZNC8 495 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TBC1D21Q8IYX1 336 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 RDH11Q8TC12 318 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SAP25Q8TEE9 199 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MECRQ9BV79 373 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TRIM54Q9BYV2 358 aa18.41■□□□□ 0.54
TNFRSF1A-213ENST00000540022 KIR2DS5A0A0G2JLQ3 304 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 A0A0G2JNG1 304 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MED19A0JLT2 244 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 OR5K4A6NMS3 321 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 KIR2DS3K7RE56 304 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CDX4O14627 284 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TM4SF5O14894 197 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 HIST1H2AGP0C0S8 130 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 HIST1H2ADP20671 130 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SERPINB4P48594 390 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CCT8P50990 548 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 GRB7Q14451 532 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 KIR2DS5Q14953 304 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 DCUN1D3Q8IWE4 304 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SFRP1Q8N474 314 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MINDY1Q8N5J2 469 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ARFGAP2Q8N6H7 521 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 FAM76AQ8TAV0 307 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SLC37A2Q8TED4 501 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 HIST1H2AHQ96KK5 128 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PKP4Q99569 1192 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 HIST1H2AJQ99878 128 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PAIP2Q9BPZ3 127 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 H2AFJQ9BTM1 129 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 HGH1Q9BTY7 390 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TRIT1Q9H3H1 467 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CNOT10Q9H9A5 744 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 ARL15Q9NXU5 204 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NUDT4Q9NZJ9 180 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms